Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns (Nature Communications, (2020), 11, 1, (728), 10.1038/s41467-019-13825-8)Jiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2022 / Art. 7573 https://doi.org/10.1038/s41467-022-32329-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower (Nature Communications, (2020), 11, 1, (734), 10.1038/s41467-019-13929-1)Shuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2022 / art. 7571 https://doi.org/10.1038/s41467-022-32343-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours (Nature Communications, (2020), 11, 1, (737), 10.1038/s41467-019-14052-x)Bhandari, Vinayak; Li, Constance H.; Bristow, Robert G,; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7569 https://doi.org/10.1038/s41467-022-32339-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer (Nature Communications, (2020), 11, 1, (733), 10.1038/s41467-019-13824-9)Sieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7574 https://doi.org/10.1038/s41467-022-32328-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)Zhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7572 https://doi.org/10.1038/s41467-022-32333-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Inferring structural variant cancer cell fraction (Nature Communications, (2020), 11, 1, (730), 10.1038/s41467-020-14351-8)Cmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2022 / Art. n.r 7568 https://doi.org/10.1038/s41467-022-32338-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Integrative pathway enrichment analysis of multivariate omics data (Nature Communications, (2020), 11, 1, (735), 10.1038/s41467-019-13983-9)Paczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2022 / art. 7570 https://doi.org/10.1038/s41467-022-32342-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7566 https://doi.org/10.1038/s41467-022-32334-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig (Nature Communications, (2020), 11, 1, (731), 10.1038/s41467-020-14352-7)Rubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7567 https://doi.org/10.1038/s41467-022-32336-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)Bailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 6232 https://doi.org/10.1038/s41467-020-20128-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Combined burden and functional impact tests for cancer driver discovery using DriverPowerShuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2020 / art. 734 https://doi.org/10.1038/s41467-019-13929-1 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patternsJiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2020 / art. 728, 12 p. : ill https://doi.org/10.1038/s41467-019-13825-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Divergent mutational processes distinguish hypoxic and normoxic tumoursBhandari, Vinayak; Li, Constance H.; Bristow, Robert G.; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2020 / art. 737, 10 p. : ill https://doi.org/10.1038/s41467-019-14052-x Article at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Erratum to: Long-haul optical transmission link using low-noise phase-sensitive amplifiers (Nature Communications, (2018), 9, 1, (2513), 10.1038/s41467-018-04956-5)Olsson, Samuel L. I.; Eliasson, Henrik; Astra, Egon; Karlsson, Magnus; Andrekson, Peter A.Nature Communications2018 / Art. nr. 3064 https://doi.org/10.1038/s41467-018-05591-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS

Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney functionPattaro, Cristian; Teumer, Alexander; Gorski, Mathias; Chu, Audrey Y.; Li, Man; Mijatovic, Vladan; Garnaas, Maija; Tin, Adrienne; Sorice, Rossella; Li, Yong; Viigimaa, MargusNature Communications2016 / art. 10023 https://doi.org/10.1038/ncomms10023 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Genomic footprints of activated telomere maintenance mechanisms in cancerSieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2020 / art. 733, 13 p. ill https://doi.org/10.1038/s41467-019-13824-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Globally invariant metabolism but density-diversity mismatch in springtailsPotapov, Anton M.; Guerra, Carlos A.; van den Hoogen, Johan; Babenko, Anatoly; Bellini, Bruno C.; Berg, Matty P.; Chown, Steven L.; Deharveng, Louis; Ivask, Mari; Kuu, AnnelyNature communications2023 / art. 674, 13 p. : ill., map https://doi.org/10.1038/s41467-023-36216-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterationsZhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 736 https://doi.org/10.1038/s41467-019-13885-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

High-sensitive nascent transcript sequencing reveals BRD4-specific control of widespread enhancer and target gene transcriptionBressin, A.; Jasnovidova, Olga; Arnold, M.; Altendorfer, E.; Trajkovski, F.; Kratz, T. A.; Handzlik, J. E.; Hnisz, D.Nature communications2023 / art. 4971 https://doi.org/10.1038/s41467-023-40633-y

In-depth analysis of transcriptomes in ovarian cortical follicles from children and adults reveals interfollicular heterogeneityRooda, Ilmatar; Hassan, Jasmin; Hao, Jie; Wagner, Magdalena; Moussaud-Lamodiere, Elisabeth; Jääger, Kersti; Otala, Marjut; Knuus, Katri; Lindskog, Cecilia; Velthut-Meikas, AgneNature communications2024 / art. 6989 https://doi.org/10.1038/s41467-024-51185-0 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Inferring structural variant cancer cell fractionCmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 730 https://doi.org/10.1038/s41467-020-14351-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Aricle at WOS

Integrative pathway enrichment analysis of multivariate omics dataPaczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 735 https://doi.org/10.1038/s41467-019-13983-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Long-haul optical transmission link using low-noise phase-sensitive amplifiersOlsson, Samuel L. I.; Eliasson, Henrik; Astra, Egon; Karlsson, Magnus; Andrekson, Peter AvoNature communications2018 / art. 2513, 7 p. : ill https://doi.org/10.1038/s41467-018-04956-5 Eesti 27 aastat internetis välismaailmaga: teadlaste uus andmeedastustehnoloogia Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

The non-catalytic role of DNA polymerase epsilon in replication initiation in human cellsVipat, Sameera Anant; Gupta, Dipika; Jonchhe, Sagun; Anderspuk, Hele; Rothenberg, Eli; Moiseeva, TatianaNature communications2022 / art. 7099 https://doi.org/10.1038/s41467-022-34911-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Nonlinear machine learning pattern recognition and bacteria-metabolite multilayer network analysis of perturbed gastric microbiomeDuran, Claudio; Ciucci, Sara; Palladini, Alessandra; Ijaz, Umer Z.; Zippo, Antonio G.; Sterbini, Francesco Paroni; Masucci, Luca; Cammarota, Giovanni; Ianiro, Gianluca; Spuul, Pirjo; Schroeder, MichaelNature communications2021 / art. 1926, 22 p https://doi.org/10.1038/s41467-021-22135-x Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Pathway and network analysis of more than 2500 whole cancer genomesReyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Uusküla-Reimand, LiisNature Communications2020 / art. 729 https://doi.org/10.1038/s41467-020-14367-0 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Plant macrofossil evidence for an early onset of the Holocene summer thermal maximum in northernmost EuropeVäliranta, Minna M.; Salonen, J. Sakari; Heikkilä, Maija P.; Amon, Leeli; Helmens, Karin F.; Klimaschewski, Andrea; Kuhry, Peter; Kultti, Seija; Poska, Anneli; Shala, Shyhrete; Veski, Siim; Birks, Hilary H.Nature Communications2015 / art. 6809 https://doi.org/10.1038/ncomms7809 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSigRubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 731 https://doi.org/10.1038/s41467-020-14352-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samplesBailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Kelso, Sean; Vijay Raghavan, KrishnaswamyNature Communications2020 / Art. nr. 4748 https://doi.org/10.1038/s41467-020-18151-y Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Sex differences in oncogenic mutational processesLi, Constance H.; Prokopec, Stephenie D.; Sun, Ren X.; Yousif, Fouad; Schmitz, Nathaniel; Al-Shahrour, Fatima; Atwal, Gurnit; Bailey, Peter J.; Biankin, Andrew V.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 4330 https://doi.org/10.1038/s41467-020-17359-2 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Squeezing formaldehyde into C60 fullereneVyas, Vijyesh K.; Bacanu, George Razvan; Soundararajan, Murari; Marsden, Elizabeth S.; Jafari, Tanzeeha; Shugai, Anna; Light, Mark E.; Nagel, Urmas; Rõõm, Toomas; Levitt, Malcolm H.; Whitby, Richard J.Nature Communications2024 / art. 2515 https://doi.org/10.1038/s41467-024-46886-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Timescales of methane seepage on the Norwegian margin following collapse of the Scandinavian Ice SheetCremiere, Antoine; Lepland, Aivo; Chand, Shyam; Martma, TõnuNature communications2016 / p. 1-10 : ill https://doi.org/10.1038/ncomms11509 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Transfer of modified gut viromes improves symptoms associated with metabolic syndrome in obese male miceMao, Xiaotian; Larsen, Sabina Birgitte; Zachariassen, Line Sidsel Fisker; Brunse, Anders; Adamberg, Signe; Mejia, Josue Leonardo Castro; Larsen, Frej; Adamberg, Kaarel; Nielsen, Dennis Sandris; Hansen, Axel Kornerup; Hansen, Camilla Hartmann Friis; Rasmussen, Torben SølbeckNature communications2024 / art. 4704 https://doi.org/10.1038/s41467-024-49152-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Validation of climate model-inferred regional temperature change for late-glacial EuropeHeiri, Oliver; Brooks, Stephen J.; Amon, Leeli; Veski, SiimNature communications2014 / p. 1-7 : ill https://doi.org/10.1038/ncomms5914 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS