Application of a hydrodynamic model to long-term monitoring data : exploring transport pathways to identify the source of high toxicity populations of Dinophysis fortii in aquaculture sites in northern JapanMiyazono, Akira; Kuribayashi, Takanori; Hada, Yasufumi; Asakura, Ken; Kobayashi, Kazuma; Mizuno, Katsuhiko; Lum, Wai Mun; Sildever, Sirje; Kuroda, Hiroshi; Nagai, SatoshiHarmful Algae2025 / art. 102976 https://doi.org/10.1016/j.hal.2025.102976 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Comparative growth characteristics and toxin profiles of three Dinophysis species isolated from the first diarrhetic shellfish toxin (DST) incident reported in Miyazu Bay, Kyoto, western JapanLum, Wai Mun; Uchida, Hajime; Funakoshi, Yuki; Miyazono, Akira; Sildever, Sirje; Matsushima, Ryoji; Suzuki, Toshiyuki; Nagai, SatoshiFisheries Science2026 / 13 p https://doi.org/10.1007/s12562-026-01992-9

Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcodingNagai, Satoshi; Sildever, Sirje; Nishi, NorikoMetabarcoding and metagenomics2022 / art. e77704 https://doi.org/10.3897/mbmg.6.77704 Journal metrics at Scopus Article at Scopus

Development of an absolute quantification method for ribosomal RNA gene copy numbers per eukaryotic single cell by digital PCRYarimizu, Kyoko; Sildever, Sirje; Hamamoto, Yoko; Tazawa, Satoshi; Oikawa, Hiroshi; Yamaguchi, Haruo; Basti, Leila; Mardones, Jorge I.; Paredes-Mella, Javier; Nagai, SatoshiHarmful Algae2021 / art. 102008, 13 p. : ill https://doi.org/10.1016/j.hal.2021.102008 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

The draft genome sequences of the cosmopolitan centric diatom, the genus SkeletonemaNagai, Satoshi; Minei, Ryuhei; Takemura, Ikuyo; Tabata, Hiromasa; Töpel, Mats; Pinder, Matthew; Kourtchenko, Olga; Lee-Kuo, Kang; Van Nguyen, Nguyen; Sildever, SirjeScientific data2025 / art. 1358, 10 p. : ill https://doi.org/10.1038/s41597-025-05432-8 Journal metrics at Scopus Article at Scopus Journal metrics at Scopus Article at WOS

Eight years of weekly eDNA monitoring in the North-Western PacificSildever, Sirje; Nishi, Noriko; Tazawa, Satoshi; Kasai, Hiromi; Hirai, Junya; Shiomoto, Akihiro; Kikuchi, Tasei; Katakura, Seiji; Nagai, SatoshiEnvironmental DNA2023 / p. 1202 - 1215 https://doi.org/10.1002/edn3.452 Journal metrics at Scopus Article at Scopus

Growth and feeding behaviour of Mixotrophic Dinophysis species in laboratory culturesNagai, Satoshi; Sildever, Sirje; Suzuki, Toshiyki; Nishitani, Goh; Basti, Leila; Kamiyama, TakashiDinoflagellates: classification, evolution, physiology and ecological significance2020 / p. 129-168 "Dinoflagellates: classification, evolution, physiology and ecological significance"

Growth, toxin content and production of Dinophysis norvegica in cultured strains isolated from Funka Bay (Japan)Nagai, Satoshi; Basti, Leila; Uchida, Hajime; Kuribayashi, Takanori; Natsuike, Masafumi; Sildever, Sirje; Nakayama, Natsuko; Lum, Wai Mun; Matsushima, RyujiToxins2023 / art. 318 https://doi.org/10.3390/toxins15050318 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcodingSildever, Sirje; Nishi, Noriko; Inaba, Nobuharu; Asakura, Taiga; Kikuchi, Jun; Asano, Yasuhito; Kobayashi, Takanori; Gojobori, Takashi; Nagai, SatoshiMetabarcoding and metagenomics2022 / art. e79471 https://doi.org/10.3897/mbmg.6.79471 Journal metrics at Scopus Article at Scopus

Monitoring of the toxic dinoflagellate Alexandrium catenella in Osaka Bay, Japan using a massively parallel sequencing (MPS)-based techniqueNagai, Satoshi; Chen, Hungyen; Kawakami, Yoko; Yamamoto, Keigo; Sildever, SirjeHarmful Algae2019 / art. 101660, 13 p. : ill https://doi.org/10.1016/j.hal.2019.101660

Plankton biodiversity and species co-occurrence based on environmental DNA - a multiple marker studySildever, Sirje; Laas, Peeter; Kolesova, Natalja; Lips, Inga; Lips, Urmas; Nagai, SatoshiMetabarcoding and metagenomics2021 / p. 175-197 : ill https://doi.org/10.3897/mbmg.5.72371 Journal metrics at Scopus Article at Scopus

Strain variability in toxin profiles and toxic potential of Dinophysis fortii populations from Southwestern and Northern Japanese coastal watersSildever, Sirje; Uchida, Hajime; Kuribayashi, Takanori; Natsuike, Masafumi; Hada, Yasufumi; Miyazono, Akira; Kosaka, Yuki; Nakayama, Natsuko; Lum, Wai Mun; Miyahara, Kazutaka; Yamamoto, Kana; Matsushima, Ryoji; Suzuki, Toshiyuki; Nagai, SatoshiHarmful Algae2025 / art. 102803, 9 p. : ill https://doi.org/10.1016/j.hal.2025.102803 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS