• Analyses of non-coding somatic drivers in 2,658 cancer whole genomesRheinbay, Esther; Nielsen, Morten Muhlig; Abascal, Federico; Wala, Jeremiah A.; Shapira, Ofer; Tiao, Grace; Hornshøj, Henrik; Hess, Julian M.; Juul, Randi Istrup; Uusküla-Reimand, LiisNature2020 / 10 p. : ill https://doi.org/10.1038/s41586-020-1965-x https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079047263&origin=inward&txGid=ed484f617e07259069abaca8723b2f62 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000529097800009
• Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns (Nature Communications, (2020), 11, 1, (728), 10.1038/s41467-019-13825-8)Jiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2022 / Art. 7573 https://doi.org/10.1038/s41467-022-32329-6 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143564414&origin=inward&txGid=43b07de1c8936ae0397adc34c82be335 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300002
• Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes (Nature, (2020), 578, 7793, (102-111), 10.1038/s41586-020-1965-x)Rheinbay, Esther; Nielsen, Morten Muhlig; Abascal, Federico; Wala, Jeremiah A.; Shapira, Ofer; Tiao, Grace; Hornshøj, Henrik; Hess, Julian M.; Juul, Randi Istrup; Lin, Ziao; Feuerbach, Lars; Sabarinathan, Radhakrishnan; Uusküla-Reimand, LiisNature2023 / p. E40 https://doi.org/10.1038/s41586-022-05599-9 https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85148250763&origin=resultslist&sort=plf-f&src=s&sid=ab6af771262882a740025f59d1076392&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+Analyses+of+non-coding+somatic+drivers+in+2%2C658+cancer+whole+genomes+%28Nature%2C+%282020%29%2C+578%2C+7793%2C+%28102-111%29%2C+10.1038%2Fs41586-020-1965-x%29%22%29&sl=84&sessionSearchId=ab6af771262882a740025f59d1076392&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000928188500004
• Author Correction: Butler enables rapid cloud-based analysis of thousands of human genomes (Nature Biotechnology, (2020), 38, 3, (288-292), 10.1038/s41587-019-0360-3)Yakneen, Sergei; Waszak, Sebastian M.; Aminou, Brice; Bartolome, Javier; Boroevich, Keith A.; Boyce, Rich; Brooks, Angela N.; Buchanan, Alex; Buchhalter, Ivo; Butler, Adam P.; Byrne, Niall J.; Cafferkey, Andy; Uusküla-Reimand, LiisAuthor Correction: Butler enables rapid cloud-based analysis of thousands of human genomes (Nature Biotechnology, (2020), 38, 3, (288-292), 10.1038/s41587-019-0360-3)2023 / p. 577 https://doi.org/10.1038/s41587-022-01554-1 https://www.scopus.com/sourceid/16115 https://www.scopus.com/record/display.uri?eid=2-s2.0-85152619137&origin=resultslist&sort=plf-f&src=s&sid=eafe6501fc5cfd828bcd253fd83ec434&sot=b&sdt=b&s=TITLE%28%22Author+Correction%3A+Butler+enables+rapid+cloud-based+analysis+of+thousands+of+human+genomes+%28Nature+Biotechnology%2C+%282020%29%2C+38%2C+3%2C+%28288-292%29%2C+10.1038%2Fs41587-019-0360-3%29%22%29&sl=175&sessionSearchId=eafe6501fc5cfd828bcd253fd83ec434&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20BIOTECHNOL&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001022337700001
• Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower (Nature Communications, (2020), 11, 1, (734), 10.1038/s41467-019-13929-1)Shuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2022 / art. 7571 https://doi.org/10.1038/s41467-022-32343-8 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143562510&origin=inward&txGid=6139fdba232dcd5f92ccf821b88fcfc1 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300009
• Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing (Nature Genetics, (2020), 52, 3, (331-341), 10.1038/s41588-019-0576-7)Cortés-Ciriano, Isidro; Lee, Jake June-Koo; Xi, Ruibin; Jain, Dhawal; Jung, Youngsook Lucy; Yang, Lixing; Gordenin, Dmitry A.; Klimczak, Leszek J.; Zhang, Cheng-Zhong; Pellman, David S.; Akdemir, Kadir Caner; Alvarez, Eva Garcia; Uusküla-Reimand, LiisNature Genetics2023 / p. 1076 https://doi.org/10.1038/s41588-023-01315-z https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85163264290&origin=resultslist&sort=plf-f&src=s&sid=40fe939808997e2b90959b0b1d9e2ee2&sot=b&sdt=b&s=TITLE%28%22Author+Correction%3A+Comprehensive+analysis+of+chromothripsis+in+2%2C658+human+cancers+using+whole-genome+sequencing+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28331-341%29%2C+10.1038%2Fs41588-019-0576-7%29%22%29&sl=192&sessionSearchId=40fe939808997e2b90959b0b1d9e2ee2&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001127232900001
• Author Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)Yuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J.; Yang, Yang; Martincorena, Inigo; Creighton, Chad J.; Weinstein, John N.; Xu, Yanxun; Han, Leng; Uusküla-Reimand, LiisNature Genetics2023 / p. 892 https://doi.org/10.1038/s41588-020-0629-y https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85084210499&origin=resultslist&sort=plf-f&src=s&sid=40fe939808997e2b90959b0b1d9e2ee2&sot=b&sdt=b&s=TITLE%28%22Author+Correction%3A+Comprehensive+molecular+characterization+of+mitochondrial+genomes+in+human+cancers+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28342-352%29%2C+10.1038%2Fs41588-019-0557-x%29%22%29&sl=192&sessionSearchId=40fe939808997e2b90959b0b1d9e2ee2&relpos=1 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000529115000001
• Author Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)Yuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J.; Yang, Yang; Martincorena, Inigo; Creighton, Chad J.; Weinstein, John N.; Xu, Yanxun; Han, Leng; Uusküla-Reimand, LiisNature Genetics2023 / p. 1078 https://doi.org/10.1038/s41588-023-01317-x https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85163252555&origin=resultslist&sort=plf-f&src=s&sid=40fe939808997e2b90959b0b1d9e2ee2&sot=b&sdt=b&s=TITLE%28%22Author+Correction%3A+Comprehensive+molecular+characterization+of+mitochondrial+genomes+in+human+cancers+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28342-352%29%2C+10.1038%2Fs41588-019-0557-x%29%22%29&sl=192&sessionSearchId=40fe939808997e2b90959b0b1d9e2ee2&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001169850500009
• Author Correction: Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer (Nature Genetics, (2020), 52, 3, (294-305), 10.1038/s41588-019-0564-y)Akdemir, Kadir Caner; Le, Victoria T.; Chandran, Sahaana; Li, Yilong; Verhaak, Roel G.W.; Beroukhim, Rameen; Campbell, Peter J.; Chin, Lynda; Dixon, Jesse R.; Futreal, Phillip Andrew; Akdemir, Kadir Caner; Alvarez, Eva Garcia; Uusküla-Reimand, LiisNature Genetics2023 / p. 1079 https://doi.org/10.1038/s41588-023-01318-w https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85163256928&origin=resultslist&sort=plf-f&src=s&sid=9760bcfd10564163e9753f09bcde9d65&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+Disruption+of+chromatin+folding+domains+by+somatic+genomic+rearrangements+in+human+cancer+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28294-305%29%2C+10.1038%2Fs41588-019-0564-y%29%22%29&sl=196&sessionSearchId=9760bcfd10564163e9753f09bcde9d65&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001127317700001
• Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours (Nature Communications, (2020), 11, 1, (737), 10.1038/s41467-019-14052-x)Bhandari, Vinayak; Li, Constance H.; Bristow, Robert G,; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7569 https://doi.org/10.1038/s41467-022-32339-4 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143567784&origin=inward&txGid=29f5a02b6018614637af774d98ecfc2e https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300007
• Author Correction: Genomic basis for RNA alterations in cancer (Nature, (2020), 578, 7793, (129-136), 10.1038/s41586-020-1970-0)Calabrese, Claudia; Davidson, Natalie R.; Demircioğlu, Deniz; Fonseca, Nuno A.; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M.; Urban, Lara; Shiraishi, Yuichi; Uusküla-Reimand, LiisNature2023 / p. E37 https://doi.org/10.1038/s41586-022-05596-y https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85148250075&origin=resultslist&sort=plf-f&src=s&sid=19629995e704ed92b778f756d6546b9d&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+Genomic+basis+for+RNA+alterations+in+cancer+%28Nature%2C+%282020%29%2C+578%2C+7793%2C+%28129-136%29%2C+10.1038%2Fs41586-020-1970-0%29%22%29&sl=145&sessionSearchId=19629995e704ed92b778f756d6546b9d&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000928188500001
• Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer (Nature Communications, (2020), 11, 1, (733), 10.1038/s41467-019-13824-9)Sieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7574 https://doi.org/10.1038/s41467-022-32328-7 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143555247&origin=inward&txGid=debb05452ca70ff1538fcdfd396c03ed https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300001
• Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)Zhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7572 https://doi.org/10.1038/s41467-022-32333-w https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143555673&origin=inward&txGid=34f2e134b50302cf292310ce1ebf578a https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300003
• Author Correction: Inferring structural variant cancer cell fraction (Nature Communications, (2020), 11, 1, (730), 10.1038/s41467-020-14351-8)Cmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2022 / Art. n.r 7568 https://doi.org/10.1038/s41467-022-32338-5 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143555910&origin=inward&txGid=fc5f5deed9307419615da674d4582372 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300006
• Author Correction: Integrative pathway enrichment analysis of multivariate omics data (Nature Communications, (2020), 11, 1, (735), 10.1038/s41467-019-13983-9)Paczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2022 / art. 7570 https://doi.org/10.1038/s41467-022-32342-9 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143559035&origin=inward&txGid=c743dc7620c54e426645c986dce08685 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300008
• Author Correction: Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition (Nature Genetics, (2020), 52, 3, (306-319), 10.1038/s41588-019-0562-0)Rodriguez-Martin, Bernardo; Alvarez, Eva Garcia; Baez-Ortega, Adrian; Zamora, Jorge; Supek, Fran; Demeulemeester, Jonas; Santamarina, Martin; Temes, Javier; Garcia-Souto, Daniel; Detering, Harald; Li, Yilong; Rodriguez-Castro, Jorge; Uusküla-Reimand, LiisNature Genetics2023 / p. 1080 https://doi.org/10.1038/s41588-023-01319-9 https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85163260191&origin=resultslist&sort=plf-f&src=s&sid=926d84819d0745b733e3396ff3a537f5&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+Pan-cancer+analysis+of+whole+genomes+identifies+driver+rearrangements+promoted+by+LINE-1+retrotransposition+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28306-319%29%2C+10.1038%2Fs41588-019-0562-0%29%22%29&sl=214&sessionSearchId=926d84819d0745b733e3396ff3a537f5&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001127317700002
• Author Correction: Pan-cancer analysis of whole genomes (Nature, (2020), 578, 7793, (82-93), 10.1038/s41586-020-1969-6)Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Agrawal, Nishant; Ahn, Keun Soo; Ahn, Sung-Min; Aikata, Hiroshi; Akbani, Rehan; Akdemir, Kadir Caner; Al-Ahmadie, Hikmat; Uusküla-Reimand, LiisNature2023 / p. E39 https://doi.org/10.1038/s41586-022-05598-w https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85148250626&origin=resultslist&sort=plf-f&src=s&sid=19629995e704ed92b778f756d6546b9d&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+Pan-cancer+analysis+of+whole+genomes+%28Nature%2C+%282020%29%2C+578%2C+7793%2C+%2882-93%29%2C+10.1038%2Fs41586-020-1969-6%29%22%29&sl=145&sessionSearchId=19629995e704ed92b778f756d6546b9d&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000920659000001
• Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7566 https://doi.org/10.1038/s41467-022-32334-9 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143568681&origin=resultslist&sort=plf-f&src=s&sid=afbdfb8930230ab229fc0c9e0cbaac78&sot=b&sdt=b&s=TITLE%28%22Author+Correction%3A+Pathway+and+network+analysis+of+more+than+2500+whole+cancer+genomes+%28Nature+Communications%2C+%282020%29%2C+11%2C+1%2C+%28729%29%2C+10.1038%2Fs41467-020-14367-0%29%22%29&sl=169&sessionSearchId=afbdfb8930230ab229fc0c9e0cbaac78 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300004
• Author Correction: Patterns of somatic structural variation in human cancer genomes (Nature, (2020), 578, 7793, (112-121), 10.1038/s41586-019-1913-9)Li, Yilong; Roberts, Nicola D.; Wala, Jeremiah A.; Shapira, Ofer; Schumacher, Steven E.; Kumar, Kiran; Khurana, Ekta; Waszak, Sebastian; Korbel, Jan O.; Haber, James E.; Imielinski, Marcin; Akdemir, Kadir Caner; Uusküla-Reimand, LiisNature2023 / p. E38 https://doi.org/10.1038/s41586-022-05597-x https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85148249857&origin=resultslist&sort=plf-f&src=s&sid=9760bcfd10564163e9753f09bcde9d65&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+Patterns+of+somatic+structural+variation+in+human+cancer+genomes+%28Nature%2C+%282020%29%2C+578%2C+7793%2C+%28112-121%29%2C+10.1038%2Fs41586-019-1913-9%29%22%29&sl=196&sessionSearchId=9760bcfd10564163e9753f09bcde9d65&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000928188500002
• Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig (Nature Communications, (2020), 11, 1, (731), 10.1038/s41467-020-14352-7)Rubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7567 https://doi.org/10.1038/s41467-022-32336-7 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85143571437&origin=inward&txGid=61b3c13de3dc7646c60f56d5457a5fb1 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:001016530300005
• Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)Bailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 6232 https://doi.org/10.1038/s41467-020-20128-w https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85096915769&origin=inward&txGid=1dfb271af851299a5168bd5bc0bc2312 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000617695200001
• Author Correction: The evolutionary history of 2,658 cancers (Nature, (2020), 578, 7793, (122-128), 10.1038/s41586-019-1907-7)Gerstung, Moritz; Jolly, Clemency; Leshchiner, Ignaty; Dentro, Stefan C.; Gonzalez, Santiago; Rosebrock, Daniel; Mitchell, Thomas J.; Rubanova, Yulia; Anur, Pavana; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Uusküla-Reimand, LiisNature2023 / p. E42 https://doi.org/10.1038/s41586-022-05601-4 https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85148250134&origin=resultslist&sort=plf-f&src=s&sid=9760bcfd10564163e9753f09bcde9d65&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+The+evolutionary+history+of+2%2C658+cancers+%28Nature%2C+%282020%29%2C+578%2C+7793%2C+%28122-128%29%2C+10.1038%2Fs41586-019-1907-7%29%22%29&sl=196&sessionSearchId=9760bcfd10564163e9753f09bcde9d65&relpos=0
• Author Correction: The landscape of viral associations in human cancers (Nature Genetics, (2020), 52, 3, (320-330), 10.1038/s41588-019-0558-9)Zapatka, Marc; Borozan, Ivan; Brewer, Daniel S.; Iskar, Murat; Grundhoff, Adam; Alawi, Malik; Desai, Nikita; Sültmann, Holger; Moch, Holger; Cooper, Colin S.; Eils, Roland; Ferretti, Vincent; Uusküla-Reimand, LiisNature Genetics2023 / p. 1077 https://doi.org/10.1038/s41588-023-01316-y https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85163263628&origin=resultslist&sort=plf-f&src=s&sid=9760bcfd10564163e9753f09bcde9d65&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+The+landscape+of+viral+associations+in+human+cancers+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28320-330%29%2C+10.1038%2Fs41588-019-0558-9%29%22%29&sl=196&sessionSearchId=9760bcfd10564163e9753f09bcde9d65&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001127317700003
• Author Correction: The repertoire of mutational signatures in human cancer (Nature, (2020), 578, 7793, (94-101), 10.1038/s41586-020-1943-3)Alexandrov, Ludmil B.; Kim, Jaegil; Haradhvala, Nicholas J.; Huang, Mi Ni; Tian Ng, Alvin Wei; Wu, Yang; Boot, Arnould; Covington, Kyle R.; Gordenin, Dmitry A.; Bergstrom, Erik N.; Islam, S. M. Ashiqul; Uusküla-Reimand, LiisNature2023 / p. E41 https://doi.org/10.1038/s41586-022-05600-5 https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85148250322&origin=resultslist&sort=plf-f&src=s&sid=9760bcfd10564163e9753f09bcde9d65&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Author+Correction%3A+The+repertoire+of+mutational+signatures+in+human+cancer+%28Nature%2C+%282020%29%2C+578%2C+7793%2C+%2894-101%29%2C+10.1038%2Fs41586-020-1943-3%29%22%29&sl=196&sessionSearchId=9760bcfd10564163e9753f09bcde9d65&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000928188500005
• Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesisCarlevaro-Fita, Joan; Lanzós, Andrés; Feuerbach, Lars; Hong, Chen; Mas-Ponte, David; Pedersen, Jakob Skou; Abascal, Federico; Amin, Samirkumar B.; Johnson, Rory; Uusküla-Reimand, LiisCommunications Biology2020 / Art. nr. 56 https://doi.org/10.1038/s42003-019-0741-7 https://www.scopus.com/sourceid/21100924827 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079071080&origin=inward&txGid=849118df5fb8148942ad55b6ccff0b7d https://jcr.clarivate.com/jcr-jp/journal-profile?journal=COMMUN%20BIOL&year=2021 https://www.webofscience.com/wos/woscc/full-record/WOS:000512019200002
• Candidate cancer driver mutations in distal regulatory elements and long-range chromatin interaction networksZhu, Helen; Uusküla-Reimand, Liis; Isaev, Keren; Wadi, Lina; Alizada, Azad; Shuai, Shimin; Huang, Vincent; Aduluso-Nwaobasi, Dike; Paczkowska, Marta; Abd-Rabbo, Diala; Ocsenas, Oliver; Liang, Minggao; Thompson, J. Drew; Li, Yao; Ruan, Luyao; Krassowski, Michal; Dzneladze, Irakli; Simpson, Jared T.; Lupien, Mathieu; Stein, Lincoln D.; Boutros, Paul C.; Wilson, Michael D.; Reimand, JüriMolecular Cell2020 / p. 1307-1321.e10 https://doi.org/10.1016/j.molcel.2019.12.027 https://www.scopus.com/sourceid/18606 https://www.scopus.com/record/display.uri?eid=2-s2.0-85078071837&origin=inward&txGid=827cc6010ca6d2124c8950a0dc28cdc5 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=MOL%20CELL&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000520893700014
• Combined burden and functional impact tests for cancer driver discovery using DriverPowerShuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2020 / art. 734 https://doi.org/10.1038/s41467-019-13929-1 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079072523&origin=inward&txGid=c0b7fb55c6a17e525cccd8aa206527ec https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700016
• Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencingCortés-Ciriano, Isidro; Lee, Jake June-Koo; Xi, Ruibin; Jain, Dhawal; Jung, Youngsook Lucy; Yang, Lixing; Gordenin, Dmitry; Klimczak, Leszek J.; Uusküla-Reimand, LiisNature Genetics2020 / p. 331-341 https://doi.org/10.1038/s41588-019-0576-7 https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079044799&origin=inward&txGid=3fa83f123ecf9a49d004452aea7aaf97 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000511282900004
• Comprehensive molecular characterization of mitochondrial genomes in human cancersYuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J.; Yang, Yang; Martincorena, Inigo; Creighton, Chad J.; Uusküla-Reimand, LiisNature Genetics2020 / p. 342 - 352 https://doi.org/10.1038/s41588-019-0557-x https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079059405&origin=inward&txGid=520fb01e5b082f4022e858174942dd6a https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000511282900005
• A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patternsJiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2020 / art. 728, 12 p. : ill https://doi.org/10.1038/s41467-019-13825-8 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079062177&origin=inward&txGid=e5e8f54212b26ea4fd81b2a4fee97801#indexed-keywords https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700010
• Disruption of chromatin folding domains by somatic genomic rearrangements in human cancerAkdemir, Kadir Caner; Le, Victoria T.; Chandran, Sahaana; Li, Yilong; Verhaak, Roel G.W.; Beroukhim, Rameen; Campbell, Peter J.; Chin, Lynda; Dixon, Jesse R.; Futreal, Phillip Andrew; Uusküla-Reimand, LiisNature Genetics2020 / p. 294 - 305 https://doi.org/10.1038/s41588-019-0564-y https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079073876&origin=inward&txGid=12b6bc4e8c6bbbada4b76343955f9546 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000511282900003
• Divergent mutational processes distinguish hypoxic and normoxic tumoursBhandari, Vinayak; Li, Constance H.; Bristow, Robert G.; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2020 / art. 737, 10 p. : ill https://doi.org/10.1038/s41467-019-14052-x https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079073682&origin=inward&txGid=ac0d060695869d897bba8bc518be9a39 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700019
• Gene expression profiling of puberty-associated genes reveals abundant tissue and sex-specific changes across postnatal developmentHou, Huayun; Uusküla-Reimand, Liis; Makarem, Maisam; Corre, Christina; Saleh, Shems; Metcalf, Ariane; Goldenberg, Anna; Palmert, Mark R.; Wilson, Michael D.Human molecular genetics2017 / p. 3585-3599 : ill https://doi.org/10.1093/hmg/ddx246 https://www.scopus.com/sourceid/22266 https://www.scopus.com/record/display.uri?eid=2-s2.0-85040686118&origin=inward&txGid=ae28ee84baa7a967bcea72b20a859902 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=HUM%20MOL%20GENET&year=2017 https://www.webofscience.com/wos/woscc/full-record/WOS:000409091200012
• Genomic footprints of activated telomere maintenance mechanisms in cancerSieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2020 / art. 733, 13 p. ill https://doi.org/10.1038/s41467-019-13824-9 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079058593&origin=inward&txGid=c939a90e5a4086a84c289e216f0e16cb https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700015
• High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterationsZhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 736 https://doi.org/10.1038/s41467-019-13885-w https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079031729&origin=inward&txGid=f365f89e8c72e5a5760840d288143f92 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700018
• Inferring structural variant cancer cell fractionCmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 730 https://doi.org/10.1038/s41467-020-14351-8 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079039901&origin=inward&txGid=49085c040623a2b48678729814ef46e4 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700012
• Integrative pathway enrichment analysis of multivariate omics dataPaczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 735 https://doi.org/10.1038/s41467-019-13983-9 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079073313&origin=inward&txGid=b08d8cd601b34dc9074c1a7e5d911a8c https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700017
• Interactome rewiring following pharmacological targeting of BET bomodomainsLambert, Jean-Philippe; Picaud, Sarah; Fujisawa, Takao; Uusküla-Reimand, LiisMolecular cell2019 / p. 621-638.e17 : ill https://doi.org/10.1016/j.molcel.2018.11.006 https://www.scopus.com/sourceid/18606 https://www.scopus.com/record/display.uri?eid=2-s2.0-85060969774&origin=inward&txGid=13cc5e298c522584ade22c655e3cc284 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=MOL%20CELL&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000458015200020
• The landscape of viral associations in human cancersZapatka, Marc; Borozan, Ivan; Brewer, Daniel S.; Iskar, Murat; Grundhoff, Adam; Alawi, Malik; Desai, Nikita; Sültmann, Holger; Moch, Holger; Cooper, Colin S.; Uusküla-Reimand, LiisNature Genetics2020 / p. 320 - 330 https://doi.org/10.1038/s41588-019-0558-9 https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079063026&origin=inward&txGid=b9121e919063322b78fd6a5583072484 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000511282900006
• Pan-cancer analysis of whole genomesCampbell, Peter J.; Getz, Gad; Korbel, Jan O.; Stuart, Joshua M.; Jennings, Jennifer L.; Stein, Lincoln D.; Perry, Marc D.; Nahal-Bose, Hardeep K.; Ouellette, B. F. Francis; Uusküla-Reimand, LiisNature2020 / 12 p. : ill https://doi.org/10.1038/s41586-020-1969-6 https://www.scopus.com/sourceid/21206 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079038817&origin=inward&txGid=c4f83b0ee92f6d110dc154bc2c2d826c https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NATURE&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000529097800007
• Pathway and network analysis of more than 2500 whole cancer genomesReyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Uusküla-Reimand, LiisNature Communications2020 / art. 729 https://doi.org/10.1038/s41467-020-14367-0 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079060258&origin=inward&txGid=323ec0beb3bab9e15fdb494948c61d95 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700011
• Publisher Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)Yuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J.; Yang, Yang; Martincorena, Inigo; Uusküla-Reimand, LiisNature Genetics2023 / p. 893 https://doi.org/10.1038/s41588-020-0587-4 https://www.scopus.com/sourceid/18990 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079451630&origin=resultslist&sort=plf-f&src=s&sid=c7f42750891f74cfdace801ff8569180&sot=b&sdt=b&s=TITLE%28%22Publisher+Correction%3A+Comprehensive+molecular+characterization+of+mitochondrial+genomes+in+human+cancers+%28Nature+Genetics%2C+%282020%29%2C+52%2C+3%2C+%28342-352%29%2C+10.1038%2Fs41588-019-0557-x%29%22%29&sl=38&sessionSearchId=c7f42750891f74cfdace801ff8569180&relpos=0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20GENET&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000512844100001
• Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSigRubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 731 https://doi.org/10.1038/s41467-020-14352-7 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079071600&origin=inward&txGid=ad8abaeaaf655b60e8928c9ecd0d4dd0 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000513499700013
• Sex differences in oncogenic mutational processesLi, Constance H.; Prokopec, Stephenie D.; Sun, Ren X.; Yousif, Fouad; Schmitz, Nathaniel; Al-Shahrour, Fatima; Atwal, Gurnit; Bailey, Peter J.; Biankin, Andrew V.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 4330 https://doi.org/10.1038/s41467-020-17359-2 https://www.scopus.com/sourceid/19700182758 https://www.scopus.com/record/display.uri?eid=2-s2.0-85079052881&origin=resultslist&sort=plf-f&src=s&sid=b46b5931327ffd74abb6a3693b3fa83e&sot=b&sdt=b&s=TITLE-ABS-KEY%28%22Sex+differences+in+oncogenic+mutational+processes%22%29&sl=66&sessionSearchId=b46b5931327ffd74abb6a3693b3fa83e https://jcr.clarivate.com/jcr-jp/journal-profile?journal=NAT%20COMMUN&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000607079100015
• Topoisomerase II beta interacts with cohesin and CTCF at topological domain bordersUusküla-Reimand, Liis; Hou, Huayun; Samavarchi-Tehrani, PaymanGenome biology2016 / art. 182, p. 1-22 : ill https://doi.org/10.1186/s13059-016-1043-8 https://www.scopus.com/sourceid/40944 https://www.scopus.com/record/display.uri?eid=2-s2.0-84984683840&origin=inward&txGid=eddf15a33e700f5c15e644c72c568a9e https://jcr.clarivate.com/jcr-jp/journal-profile?journal=GENOME%20BIOL&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000383428100001