• Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcodingNagai, Satoshi; Sildever, Sirje; Nishi, NorikoMetabarcoding and metagenomics2022 / art. e77704 https://doi.org/10.3897/mbmg.6.77704 https://www.scopus.com/sourceid/21101022488 https://www.scopus.com/record/display.uri?eid=2-s2.0-85126627168&origin=inward&txGid=978fb98277639e69349cb63b698c636d
• Development of an absolute quantification method for ribosomal RNA gene copy numbers per eukaryotic single cell by digital PCRYarimizu, Kyoko; Sildever, Sirje; Hamamoto, Yoko; Tazawa, Satoshi; Oikawa, Hiroshi; Yamaguchi, Haruo; Basti, Leila; Mardones, Jorge I.; Paredes-Mella, Javier; Nagai, SatoshiHarmful Algae2021 / art. 102008, 13 p. : ill https://doi.org/10.1016/j.hal.2021.102008 https://www.scopus.com/sourceid/19723 https://www.scopus.com/record/display.uri?eid=2-s2.0-85102472089&origin=inward&txGid=d41959b375b031f75d1bc7f331cb7bdc https://jcr.clarivate.com/jcr-jp/journal-profile?journal=HARMFUL%20ALGAE&year=2021 https://www.webofscience.com/wos/woscc/full-record/WOS:000651294000006
• The draft genome sequences of the cosmopolitan centric diatom, the genus SkeletonemaNagai, Satoshi; Minei, Ryuhei; Takemura, Ikuyo; Tabata, Hiromasa; Töpel, Mats; Pinder, Matthew; Kourtchenko, Olga; Lee-Kuo, Kang; Van Nguyen, Nguyen; Sildever, SirjeScientific data2025 / art. 1358 https://doi.org/10.1038/s41597-025-05432-8
• Eight years of weekly eDNA monitoring in the North-Western PacificSildever, Sirje; Nishi, Noriko; Tazawa, Satoshi; Kasai, Hiromi; Hirai, Junya; Shiomoto, Akihiro; Kikuchi, Tasei; Katakura, Seiji; Nagai, SatoshiEnvironmental DNA2023 / p. 1202 - 1215 https://doi.org/10.1002/edn3.452 https://www.scopus.com/sourceid/21101043805 https://www.scopus.com/record/display.uri?eid=2-s2.0-85166416973&origin=inward&txGid=d5319fd5b0177d986705cfe704030e69
• Growth and feeding behaviour of Mixotrophic Dinophysis species in laboratory culturesNagai, Satoshi; Sildever, Sirje; Suzuki, Toshiyki; Nishitani, Goh; Basti, Leila; Kamiyama, TakashiDinoflagellates: classification, evolution, physiology and ecological significance2020 / p. 129-168 https://novapublishers.com/shop/dinoflagellates-classification-evolution-physiology-and-ecological-significance/
• Growth, toxin content and production of Dinophysis norvegica in cultured strains isolated from Funka Bay (Japan)Nagai, Satoshi; Basti, Leila; Uchida, Hajime; Kuribayashi, Takanori; Natsuike, Masafumi; Sildever, Sirje; Nakayama, Natsuko; Lum, Wai Mun; Matsushima, RyujiToxins2023 / art. 318 https://doi.org/10.3390/toxins15050318 https://www.scopus.com/sourceid/19700188352 https://www.scopus.com/record/display.uri?eid=2-s2.0-85160331708&origin=inward&txGid=6746e2a580177fa53e01f71b8dc5c452 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=TOXINS&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000998025900001
• Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcodingSildever, Sirje; Nishi, Noriko; Inaba, Nobuharu; Asakura, Taiga; Kikuchi, Jun; Asano, Yasuhito; Kobayashi, Takanori; Gojobori, Takashi; Nagai, SatoshiMetabarcoding and metagenomics2022 / art. e79471 https://doi.org/10.3897/mbmg.6.79471 https://www.scopus.com/sourceid/21101022488 https://www.scopus.com/record/display.uri?eid=2-s2.0-85149587942&origin=inward&txGid=37dbfa10dedc874464e18f76d77715d0
• Monitoring of the toxic dinoflagellate Alexandrium catenella in Osaka Bay, Japan using a massively parallel sequencing (MPS)-based techniqueNagai, Satoshi; Chen, Hungyen; Kawakami, Yoko; Yamamoto, Keigo; Sildever, SirjeHarmful Algae2019 / art. 101660, 13 p. : ill https://doi.org/10.1016/j.hal.2019.101660
• Plankton biodiversity and species co-occurrence based on environmental DNA - a multiple marker studySildever, Sirje; Laas, Peeter; Kolesova, Natalja; Lips, Inga; Lips, Urmas; Nagai, SatoshiMetabarcoding and metagenomics2021 / p. 175-197 : ill https://doi.org/10.3897/mbmg.5.72371 https://www.scopus.com/sourceid/21101022488 https://www.scopus.com/record/display.uri?eid=2-s2.0-85119582023&origin=inward&txGid=755fd96e1f125416c5aaefb169c9f823
• Strain variability in toxin profiles and toxic potential of Dinophysis fortii populations from Southwestern and Northern Japanese coastal watersSildever, Sirje; Uchida, Hajime; Kuribayashi, Takanori; Natsuike, Masafumi; Hada, Yasufumi; Miyazono, Akira; Kosaka, Yuki; Nakayama, Natsuko; Lum, Wai Mun; Miyahara, Kazutaka; Yamamoto, Kana; Matsushima, Ryoji; Suzuki, Toshiyuki; Nagai, SatoshiHarmful Algae2025 / art. 102803 https://doi.org/10.1016/j.hal.2025.102803