• Abiotic factors controlling the cyanobacterial bloom occurrence in the Gulf of FinlandLips, Inga2005 http://dspace.ut.ee/handle/10062/940
• BalticSeaNow.info : marine research = MereteadusLips, Inga; Lips, Urmas; Ojamäe, Karin; Laas, Peeter2013 https://www.ester.ee/record=b2927803*est
• Bimodal distribution patterns of motile phytoplankton in relation to physical processes and stratification (Gulf of Finland, Baltic Sea)Lips, Urmas; Lips, IngaDeep-sea research part II: Topical studies in oceanography2014 / p. 107-119 : ill https://doi.org/10.1016/j.dsr2.2013.05.029 https://www.scopus.com/sourceid/26831 https://www.scopus.com/record/display.uri?eid=2-s2.0-84900660482&origin=inward&txGid=2347dc23be2602c590ae41385d188fe9 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=DEEP-SEA%20RES%20PT%20II&year=2014 https://www.webofscience.com/wos/woscc/full-record/WOS:000334141700009
• Biochemical definition of coastal zone using numerical modeling and measurement dataLessin, Gennadi2007 https://digi.lib.ttu.ee/i/?90 https://www.ester.ee/record=b2298253*est
• Biotic turnover rates during the Pleistocene-Holocene transitionStivrinš, Normunds; Soininen, Janne; Amon, Leeli; Reitalu, Triin; Veski, SiimQuaternary science reviews2016 / p. 100-110 : ill https://doi.org/10.1016/j.quascirev.2016.09.008 https://www.scopus.com/sourceid/26239 https://www.scopus.com/record/display.uri?eid=2-s2.0-84988019741&origin=inward&txGid=c87d340b23a1e9bac2190323a225982c https://jcr.clarivate.com/jcr-jp/journal-profile?journal=QUATERNARY%20SCI%20REV&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000386404300006
• Characteristics of sub-surface chlorophyll maxima observed in the Gulf of Finland in July 2006Kuvaldina, Natalja; Lips, Urmas; Lips, Inga; Liblik, TaaviBSSC 2009 : [7th Baltic Sea Science Congress 2009] : August 17-21, 2009, Tallinn, Estonia : abstract book2009 / p. 29
• Chlorophyll a and phytoplankton bloomsKauppila, Pirkko; Eremina, Tatjana; Ershova, Alexandra; Maximov, Alexey; Lips, Inga; Lips, UrmasThe Gulf of Finland assessment2016 / p. 114-123 : ill http://hdl.handle.net/10138/166296
• Defining the extent of coastal zone for ecosystem-based managementLessin, Gennadi; Raudsepp, UrmasUS/EU-Baltic International Symposium : Ocean observations, ecosystem-based management & forecasting : May 27-29, 2008, Tallinn, Estonia : book of abstracts2008 / p. 84
• Development of an absolute quantification method for ribosomal RNA gene copy numbers per eukaryotic single cell by digital PCRYarimizu, Kyoko; Sildever, Sirje; Hamamoto, Yoko; Tazawa, Satoshi; Oikawa, Hiroshi; Yamaguchi, Haruo; Basti, Leila; Mardones, Jorge I.; Paredes-Mella, Javier; Nagai, SatoshiHarmful Algae2021 / art. 102008, 13 p. : ill https://doi.org/10.1016/j.hal.2021.102008 https://www.scopus.com/sourceid/19723 https://www.scopus.com/record/display.uri?eid=2-s2.0-85102472089&origin=inward&txGid=d41959b375b031f75d1bc7f331cb7bdc https://jcr.clarivate.com/jcr-jp/journal-profile?journal=HARMFUL%20ALGAE&year=2021 https://www.webofscience.com/wos/woscc/full-record/WOS:000651294000006
• DNA metabarcoding: Guidelines to monitor phytoplankton diversity and distribution in marine and brackish watersJerney, Jacqueline; Hällfors, Heidi; Jakobsen, Hans; Jurgensone, Iveta; Karlson, Bengt; Kremp, Anke; Lehtinen, Sirpa; Majaneva, Markus; Meissner, Kristian; Norros, Veera; Sildever, Sirje; Suikkanen, Sanna; Teeveer, Karolin2023 http://https://www.norden.org/en/publication/dna-metabarcoding https://doi.org/10.6027/temanord2023-505
• Dynamics of phytoplankton pigments in water and surface sediments of a large shallow lakeFreiberg, Rene; Nõmm, Monika; Tõnno, Ilmar; Alliksaar, Tiiu; Nõges, Tiina; Kisand, AnuEstonian journal of earth sciences2011 / 2, p. 91-101 : ill https://artiklid.elnet.ee/record=b2414184*est
• Environmental variables driving species and genus level changes in annual plankton biomassForsblom, Louise; Engström-Öst, Jonna; Lehtinen, Sirpa; Lips, Inga; Linden, AndreasJournal of plankton research2019 / p. 925–938 : ill https://doi.org/10.1093/plankt/fbz063 https://www.scopus.com/sourceid/29635 https://www.scopus.com/record/display.uri?eid=2-s2.0-85082104901&origin=inward&txGid=89f9a91675b6131194c58a039ddb2fe8 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=J%20PLANKTON%20RES&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000508115500010
• Fütoplanktoni vähem tuntud poolLips, IngaEesti Loodus2011 / 11, lk. 26-28 : ill https://artiklid.elnet.ee/record=b2440282*est
• History of anthropogenically mediated eutrophication of Lake Peipsi as revealed by the stratigraphy of fossil pigments and molecular size fractions of pore-water dissolved organic matterLeeben, Aina; Tõnno, Ilmar; Freiberg, Rene; Lepane, Viia; Bonningues, Nicolas; Makarõtševa, Natalja; Heinsalu, Atko; Alliksaar, TiiuHydrobiologia2008 / p. 49-58 : ill https://doi.org/10.1007/978-1-4020-8379-2_6
• Impact of ship-borne nitrogen deposition on the Gulf of Finland ecosystem : an evaluationRaudsepp, Urmas; Laanemets, Jaan; Maljutenko, Ilja; Hongisto, Marke; Jalkanen, Jukka-PekkaOceanologia2013 / p. 837 - 857 https://doi.org/10.5697/oc.55-4.837 https://www.scopus.com/sourceid/28374 https://www.scopus.com/record/display.uri?eid=2-s2.0-84887287302&origin=resultslist&sort=plf-f&src=s&sot=b&sdt=b&s=DOI%2810.5697%2Foc.55-4.837%29&sessionSearchId=09c53dd41ef9fa4501d393829f4e1654 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=OCEANOLOGIA&year=2013 https://www.webofscience.com/wos/woscc/full-record/WOS:000333774000004
• Influence of meso-scale dynamics on the phytoplankton distribution and species composition in the Gulf of Finland in July 2007Altoja, Kristi; Kikas, Villu; Kuvaldina, Natalja; Lips, Urmas; Lips, IngaBSSC 2009 : [7th Baltic Sea Science Congress 2009] : August 17-21, 2009, Tallinn, Estonia : abstract book2009 / p. 212
• Introduction to the Chemical Oceanography of Frontal ZonesBelkin, Igor M.; Aliani, Stefano; Alkire, Matthew B.; Badewien, Thomas H.; Berta, Maristella; Durán Gómez, Gloria Silvana; Eliasen, Solva Karadottir; Elken, Jüri; Griffa, Annalisa; Suursaar, ÜloThe Handbook of Environmental Chemistry2022 / p. 1-23 https://doi.org/10.1007/698_2022_894 https://www.scopus.com/sourceid/21100416079 https://www.scopus.com/record/display.uri?eid=2-s2.0-85159303093&origin=inward&txGid=4bad38fd12af53bec8d39a990d4aee36
• Longitudinal transformation of estuarine transport controlled to mixing controlled nutrient, oxygen and detritus dynamics in the Gulf of FinlandKõuts, Tarmo; Raudsepp, Urmas; Maljutenko, IljaThe 11th Baltic Sea Science Congress "Living Along Gradients : Past, Present, Future" : June 12-16, 2017 : abstracts2017 / p. 200 https://www.io-warnemuende.de/tl_files/conference/bssc2017/bssc2017-abstract-book.pdf
• Management of Lake Ülemiste, a drinking water reservoir = Ülemiste järve kui joogiveehoidla haldaminePedusaar, Tiia2010 https://www.ester.ee/record=b2595247*est
• Mesoscale physical processes and the related impact on the summer nutrient fields and phytoplankton blooms in the western Gulf of FinlandPavelson, Juss2005 https://www.ester.ee/record=b2073510*est
• Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcodingSildever, Sirje; Nishi, Noriko; Inaba, Nobuharu; Asakura, Taiga; Kikuchi, Jun; Asano, Yasuhito; Kobayashi, Takanori; Gojobori, Takashi; Nagai, SatoshiMetabarcoding and metagenomics2022 / art. e79471 https://doi.org/10.3897/mbmg.6.79471 https://www.scopus.com/sourceid/21101022488 https://www.scopus.com/record/display.uri?eid=2-s2.0-85149587942&origin=inward&txGid=37dbfa10dedc874464e18f76d77715d0
• Non-pollen palynomorphs from 78 surface sediment samples reveal spatial distribution of phytoplankton in Latvian lakes and pondsStivrinš, NormundsEstonian journal of earth sciences2023 / p. 226-235 https://doi.org/10.3176/earth.2023.87 https://www.scopus.com/sourceid/6000195392 https://www.scopus.com/record/display.uri?eid=2-s2.0-85185971183&origin=inward&txGid=5c69955b14f211ddfcb517745ad7ea82 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=EST%20J%20EARTH%20SCI&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:001098356400002
• Phytoplankton blooms in the Baltic SeaRaudsepp, Urmas; She, Jun; Brando, Vittorio E.; Santoleri, Rosalia; Sammartino, Michela; Kõuts, Mariliis; Uiboupin, Rivo; Maljutenko, IljaJournal of operational oceanography2019 / p. s21-s26 : ill., map https://doi.org/10.1080/1755876X.2019.1633075
• Phytoplankton distribution affected by the coastal upwelling event in the Gulf of Finland in August 2006 : observational resultsLips, Inga; Lips, UrmasBSSC 2009 : [7th Baltic Sea Science Congress 2009] : August 17-21, 2009, Tallinn, Estonia : abstract book2009 / p. 44
• Phytoplankton dynamics affected by the coastal upwelling events in the Gulf of Finland in July-August 2006Lips, Inga; Lips, UrmasJournal of plankton research2010 / p. 1269-1282 : ill
• Phytoplankton response to the environmental and climatic variability in a temperate lake over the last 14,500 years in eastern LatviaStivrinš, Normunds; Kołaczek, Piotr; Reitalu, Triin; Seppä, Heikki T.; Veski, SiimJournal of Paleolimnology2015 / p. 103 - 119 https://doi.org/10.1007/s10933-015-9840-8 https://www.scopus.com/sourceid/13937 https://www.scopus.com/record/display.uri?eid=2-s2.0-84929943498&origin=inward&txGid=1635dc9098f5fcb453a8d723a2b50155 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=J%20PALEOLIMNOL&year=2015 https://www.webofscience.com/wos/woscc/full-record/WOS:000355218100006
• Plankton biodiversity and species co-occurrence based on environmental DNA - a multiple marker studySildever, Sirje; Laas, Peeter; Kolesova, Natalja; Lips, Inga; Lips, Urmas; Nagai, SatoshiMetabarcoding and metagenomics2021 / p. 175-197 : ill https://doi.org/10.3897/mbmg.5.72371 https://www.scopus.com/sourceid/21101022488 https://www.scopus.com/record/display.uri?eid=2-s2.0-85119582023&origin=inward&txGid=755fd96e1f125416c5aaefb169c9f823
• Postglacial environmental conditions, vegetation succession and human impact In Latvia = Pärastjääaja keskkonnatingimused, taimestik ja inimmõju LätisStivrinš, Normunds2015 https://www.ester.ee/record=b4447416*est
• Processes influencing the spatio-temporal dynamics of nutrients and phytoplankton in summer in the Gulf of Finland, Baltic Sea = Toitainete ja fütoplanktoni ajalis-ruumilist muutlikkust mõjutavad protsessid suvel Soome lahesBuhhalko, Natalja2015 https://digi.lib.ttu.ee/i/?3668 https://www.ester.ee/record=b4510529*est
• Reliable environmental DNA detection of planktonic biodiversity : minimum sample volume for DNA metabarcodingSildever, Sirje; Edvardsen, Bente; Egge, Elianne; Engesmo, Anette; Harðardóttir, Sara; Jacobsen, Asa; Jacobsen, Hans; Jurgensone, Iveta; Pärt, Kristian; Rünk, Nelli2025 https://doi.org/10.6027/temanord2025-509 https://pub.norden.org/temanord2025-509/temanord2025-509.pdf
• Sedimentary carbon forms in relation to climate and phytoplankton biomass in a large, shallow, hard-water boreal lakeEhapalu, Kristiina; Tõnno, Ilmar; Reitalu, Triin; Alliksaar, Tiiu; Liiv, Merlin; Freiberg, Rene; Nõges, PeeterJournal of paleolimnology2017 / p. 81-93 : ill https://doi.org/10.1007/s10933-016-9931-1 https://www.scopus.com/sourceid/13937 https://www.scopus.com/record/display.uri?eid=2-s2.0-84996844251&origin=inward&txGid=448ffbd4f39192ccd219a2a073447b3d https://jcr.clarivate.com/jcr-jp/journal-profile?journal=J%20PALEOLIMNOL&year=2017 https://www.webofscience.com/wos/woscc/full-record/WOS:000392073600006
• Spatial distribution of hydrographic and biochemical variables in a small coastal bay : explanation using systems approachLessin, Gennadi; Raudsepp, Urmas; Passenko, Jelena; Altoja, Kristi; Martin, Georg; Sipelgas, LiisBSSC 2009 : [7th Baltic Sea Science Congress 2009] : August 17-21, 2009, Tallinn, Estonia : abstract book2009 / p. 45
• Spatio-temporal interdependence of bacteria and phytoplankton during a Baltic Sea spring bloomBunse, Carina; Bertos-Fortis, Mireia; Sassenhagen, Ingrid; Sildever, Sirje; Lips, IngaFrontiers in microbiology2016 / p. 1-10 : ill https://doi.org/10.3389/fmicb.2016.00517 https://www.scopus.com/sourceid/21100226442 https://www.scopus.com/record/display.uri?eid=2-s2.0-84966263551&origin=inward&txGid=ef9395bf2131a7debc6601c26fcbd147 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=FRONT%20MICROBIOL&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000374468900001
• The Great Ordovician Biodiversification Event: Linked to phytoplankton evolution or to asteroid impacts?Servais, T.; Hints, Olle; Kröger, Björn; Nõlvak, Jaak; Vecoli, M.; Wallin, A.The Seventh Baltic Stratigraphical Conference : 17-18 May 2008, Tallinn, Estonia : abstracts & field guide2008 / p. 63
• Toxic HAB species from the Sea of Okhotsk detected by a metagenetic approach, seasonality and environmental driversSildever, Sirje; Kawakami, Yoko; Kanno, NanakoHarmful Algae2019 / art. 101631, 12 p. : ill https://doi.org/10.1016/j.hal.2019.101631
• Understanding harmful algae in stratified systems: Review of progress and future directionsBerdalet, E.; McManus, M.A.; Ross, O.N.; Burchard, H.; Chavez, F.P.; Jaffe, J.S.; Jenkinson, I.R.; Kudela, R.; Lips, Inga; Lips, UrmasDeep-sea research part II: Topical studies in oceanography2014 / p. 4-20 : ill https://doi.org/10.1016/j.dsr2.2013.09.042 https://www.scopus.com/sourceid/26831 https://www.scopus.com/record/display.uri?eid=2-s2.0-84900625849&origin=inward&txGid=ed6d5731a3610fa6680be2d982a16e22 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=DEEP-SEA%20RES%20PT%20II&year=2014 https://www.webofscience.com/wos/woscc/full-record/WOS:000334141700002
• Vertical dynamics of summer phytoplankton in a stratified estuary (Gulf of Finland, Baltic Sea)Lips, Urmas; Lips, Inga; Liblik, Taavi; Kikas, Villu; Altoja, Kristi; Buhhalko, Natalja; Rünk, NelliOcean dynamics2011 / p. 903-915 : ill
• Winter re-stratification events and their consequences in the NE Baltic SeaLiblik, Taavi; Väli, Germo; Künnis-Beres, Kai; Lilover, Madis-Jaak; Lips, IngaAbstracts : [BSSC 2019]2019 / p. 208 https://www.su.se/polopoly_fs/1.446756.1566224624!/menu/standard/file/abstracts_A5_ny.pdf
• The winter stratification phenomenon and its consequences in the Gulf of Finland, Baltic SeaLiblik, Taavi; Väli, Germo; Lips, Inga; Lilover, Madis-Jaak; Kikas, Villu; Laanemets, JaanOcean Science2020 / p. 1475 - 1490 https://doi.org/10.5194/os-16-1475-2020 https://www.scopus.com/sourceid/4400151705 https://www.scopus.com/record/display.uri?eid=2-s2.0-85097383231&origin=inward&txGid=376b054a980e42e29a22b511d28ebaf6 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=OCEAN%20SCI&year=2022 https://www.webofscience.com/wos/woscc/full-record/WOS:000595592400001
• К вопросу об осеньем фитопланктоне Каунасского водохранилищаŠenberg, N.; Nepratskas, A.; Karu, Jaan; Lond, HeldurМатериалы XXII республиканской научно-технической конференции.[1]: Секция машиностроения1972