• Evaluation of enzyme-constrained genome-scale model through metabolic engineering of anaerobic co-production of 2,3-butanediol and glycerol by Saccharomyces cerevisiaeSjöberg, Gustav; Reķena, Alina; Fornstad, Matilda; Lahtvee, Petri-Jaan; Van Maris, Antionius J. A.Metabolic engineering2024 / p. 49-59 https://doi.org/10.1016/j.ymben.2024.01.007 https://www.scopus.com/sourceid/16339 https://www.scopus.com/pages/publications/85183971243?inward https://jcr.clarivate.com/jcr-jp/journal-profile?journal=METAB%20ENG&year=2024 https://www.webofscience.com/wos/woscc/full-record/WOS:001181818000001
• Genome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloidesReķena, Alina; Pinheiro, Marina J.; Bonturi, Nemailla; Belouah, Isma; Tammekivi, Eliise; Herodes, Koit; Kerkhoven, Eduard J.; Lahtvee, Petri-JaanPLoS computational biology2023 / art. e1011009 https://doi.org/10.1371/journal.pcbi.1011009 https://www.scopus.com/sourceid/4000151810 https://www.scopus.com/record/display.uri?eid=2-s2.0-85160009114&origin=inward&txGid=81d0d2dbb6be9a848fcdc247b7f84f41 https://jcr.clarivate.com/jcr-jp/journal-profile?journal=PLOS%20COMPUT%20BIOL&year=2023 https://www.webofscience.com/wos/woscc/full-record/WOS:000977259800001
• Genome-scale modelling-based discovery of metabolic strategies in oleaginous yeast Rhodotorula toruloidesReķena, Alina; Pinheiro, Marina J.; Bonturi, Nemailla; Belouah, Isma; Tammekivi, Eliise; Herodes, Koit; Kerkhoven, Eduard J.; Lahtvee, Petri-Jaan8th conference on physiology of yeasts and filamentous fungi (PYFF8) : abstract book2023 / p. 47-48 https://efbiotechnology.org/images/uploads/PYFF8_Abstract_book.pdf
• The role of ATP citrate lyase, phosphoketolase, and malic enzyme in oleaginous Rhodotorula toruloidesReķena, Alina; Pals, Kristjan; Gavrilovic, Srdjan; Lahtvee, Petri-JaanApplied microbiology and biotechnology2025 / art. 77 https://doi.org/10.1007/s00253-025-13454-w
• Thermodynamics-based model-driven discovery of metabolic strategies in oleaginous yeast Rhodotorula toruloidesReķena, Alina; Smith, Edward N.; Heinemann, Matthias; Lahtvee, Petri-JaanMetabolic Engineering 15 (ME15) : conference proceedings2023 / Art. 52 https://aiche.confex.com/aiche/me15/meetingapp.cgi/Paper/659438