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dissertation

ABCA4 locus as a model for complex genetics in monogenic diseases = ABCA4 lookus kui monogeensete haiguste kompleksse geneetika mudelZernant, Jana2019 https://digi.lib.ttu.ee/i/?12387 https://www.ester.ee/record=b5235122*est

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journal article EST / journal article ENG

Analyses of non-coding somatic drivers in 2,658 cancer whole genomesRheinbay, Esther; Nielsen, Morten Muhlig; Abascal, Federico; Wala, Jeremiah A.; Shapira, Ofer; Tiao, Grace; Hornshøj, Henrik; Hess, Julian M.; Juul, Randi Istrup; Uusküla-Reimand, LiisNature2020 / 10 p. : ill https://doi.org/10.1038/s41586-020-1965-x Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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journal article

ASK1, a SKP1 homolog, is required for nuclear reorganization, presynaptic homolog juxtaposition and the proper distribution of cohesin during meiosis in ArabidopsisZhao, Dazhong; Yang, Xiaohui; Quan, Li; Timofejeva, LjudmillaPlant molecular biology2006 / 1/2, p. 99-110 https://www.researchgate.net/publication/6890651_ASK1_a_SKP1_homolog_is_required_for_nuclear_reorganization_presynaptic_homolog_juxtaposition_and_the_proper_distribution_of_cohesin_during_meiosis_in_Arabidopsis

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Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns (Nature Communications, (2020), 11, 1, (728), 10.1038/s41467-019-13825-8)Jiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2022 / Art. 7573 https://doi.org/10.1038/s41467-022-32329-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes (Nature, (2020), 578, 7793, (102-111), 10.1038/s41586-020-1965-x)Rheinbay, Esther; Nielsen, Morten Muhlig; Abascal, Federico; Wala, Jeremiah A.; Shapira, Ofer; Tiao, Grace; Hornshøj, Henrik; Hess, Julian M.; Juul, Randi Istrup; Lin, Ziao; Feuerbach, Lars; Sabarinathan, Radhakrishnan; Uusküla-Reimand, LiisNature2023 / p. E40 https://doi.org/10.1038/s41586-022-05599-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing (Nature Genetics, (2020), 52, 3, (331-341), 10.1038/s41588-019-0576-7)Cortés-Ciriano, Isidro; Lee, Jake June-Koo; Xi, Ruibin; Jain, Dhawal; Jung, Youngsook Lucy; Yang, Lixing; Gordenin, Dmitry A.; Klimczak, Leszek J.; Zhang, Cheng-Zhong; Pellman, David S.; Akdemir, Kadir Caner; Alvarez, Eva Garcia; Uusküla-Reimand, LiisNature Genetics2023 / p. 1076 https://doi.org/10.1038/s41588-023-01315-z Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours (Nature Communications, (2020), 11, 1, (737), 10.1038/s41467-019-14052-x)Bhandari, Vinayak; Li, Constance H.; Bristow, Robert G,; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7569 https://doi.org/10.1038/s41467-022-32339-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)Zhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7572 https://doi.org/10.1038/s41467-022-32333-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7566 https://doi.org/10.1038/s41467-022-32334-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Patterns of somatic structural variation in human cancer genomes (Nature, (2020), 578, 7793, (112-121), 10.1038/s41586-019-1913-9)Li, Yilong; Roberts, Nicola D.; Wala, Jeremiah A.; Shapira, Ofer; Schumacher, Steven E.; Kumar, Kiran; Khurana, Ekta; Waszak, Sebastian; Korbel, Jan O.; Haber, James E.; Imielinski, Marcin; Akdemir, Kadir Caner; Uusküla-Reimand, LiisNature2023 / p. E38 https://doi.org/10.1038/s41586-022-05597-x Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig (Nature Communications, (2020), 11, 1, (731), 10.1038/s41467-020-14352-7)Rubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7567 https://doi.org/10.1038/s41467-022-32336-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)Bailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 6232 https://doi.org/10.1038/s41467-020-20128-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: The evolutionary history of 2,658 cancers (Nature, (2020), 578, 7793, (122-128), 10.1038/s41586-019-1907-7)Gerstung, Moritz; Jolly, Clemency; Leshchiner, Ignaty; Dentro, Stefan C.; Gonzalez, Santiago; Rosebrock, Daniel; Mitchell, Thomas J.; Rubanova, Yulia; Anur, Pavana; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Uusküla-Reimand, LiisNature2023 / p. E42 https://doi.org/10.1038/s41586-022-05601-4 Journal metrics at Scopus Article at Scopus

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Author Correction: The repertoire of mutational signatures in human cancer (Nature, (2020), 578, 7793, (94-101), 10.1038/s41586-020-1943-3)Alexandrov, Ludmil B.; Kim, Jaegil; Haradhvala, Nicholas J.; Huang, Mi Ni; Tian Ng, Alvin Wei; Wu, Yang; Boot, Arnould; Covington, Kyle R.; Gordenin, Dmitry A.; Bergstrom, Erik N.; Islam, S. M. Ashiqul; Uusküla-Reimand, LiisNature2023 / p. E41 https://doi.org/10.1038/s41586-022-05600-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Candidate cancer driver mutations in distal regulatory elements and long-range chromatin interaction networksZhu, Helen; Uusküla-Reimand, Liis; Isaev, Keren; Wadi, Lina; Alizada, Azad; Shuai, Shimin; Huang, Vincent; Aduluso-Nwaobasi, Dike; Paczkowska, Marta; Abd-Rabbo, Diala; Ocsenas, Oliver; Liang, Minggao; Thompson, J. Drew; Li, Yao; Ruan, Luyao; Krassowski, Michal; Dzneladze, Irakli; Simpson, Jared T.; Lupien, Mathieu; Stein, Lincoln D.; Boutros, Paul C.; Wilson, Michael D.; Reimand, JüriMolecular Cell2020 / p. 1307-1321.e10 https://doi.org/10.1016/j.molcel.2019.12.027 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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book article

Characterization of novel anther mutants in maizeMoon, Jihyun; Timofejeva, Ljudmilla; Lee, Sidae53rd Annual Maize Genetics Conference Abstracts : St. Charles, Illinois, USA, March 17-20, 20112011 / p. P096

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Combined burden and functional impact tests for cancer driver discovery using DriverPowerShuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2020 / art. 734 https://doi.org/10.1038/s41467-019-13929-1 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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journal article EST / journal article ENG

Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencingCortés-Ciriano, Isidro; Lee, Jake June-Koo; Xi, Ruibin; Jain, Dhawal; Jung, Youngsook Lucy; Yang, Lixing; Gordenin, Dmitry; Klimczak, Leszek J.; Uusküla-Reimand, LiisNature Genetics2020 / p. 331-341 https://doi.org/10.1038/s41588-019-0576-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Comprehensive molecular characterization of mitochondrial genomes in human cancersYuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J.; Yang, Yang; Martincorena, Inigo; Creighton, Chad J.; Uusküla-Reimand, LiisNature Genetics2020 / p. 342 - 352 https://doi.org/10.1038/s41588-019-0557-x Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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CRISPR/Cas-mediated plant genome editing : outstanding challenges a decade after implementationCardi, Teodoro; Murovec, Jana; Bakhsh, Allah; Boniecka, Justyna; Bruegmann, Tobias; Bull, Simon E.; Eeckhaut, Tom; Fladung, Matthias; Galovic, Vladislava; Linkiewicz, Anna; Lukan, Tjaša; Mafra, Isabel; Michalski, Krzysztof; Kavas, Musa; Nicolia, Alessandro; Nowakowska, Justyna; Sagi, Laszlo; Sarmiento Guerin, Maria Cecilia; Yıldırım, Kubilay; Zlatkovic, Milica; Hensel, Goetz; Van Laere, KatrijnTrends in plant science2023 / p. 1144-1165 https://doi.org/10.1016/j.tplants.2023.05.012 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patternsJiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2020 / art. 728, 12 p. : ill https://doi.org/10.1038/s41467-019-13825-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Differential patterns of cross-reactive antibody response against SARS-CoV-2 spike protein detected for chronically ill and healthy COVID-19 naïve individualsJaago, Mariliis; Rähni, Annika; Pupina, Nadezda; Sadam, Helle; Tuvikene, Jürgen; Avarlaid, Annela; Planken, Anu; Planken, Margus; Haring, Liina; Vasar, Eero; Bacevic, Miljana; Lambert, France; Kalso, Eija; Pussinen, Pirkko; Tienari, Pentti J.; Vaheri, Antti; Lindholm, Dan; Timmusk, Tõnis; Ghaemmaghami, Amir M.; Palm, KaiaScientific reports2022 / art. 16817 : ill https://doi.org/10.1038/s41598-022-20849-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Divergent mutational processes distinguish hypoxic and normoxic tumoursBhandari, Vinayak; Li, Constance H.; Bristow, Robert G.; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2020 / art. 737, 10 p. : ill https://doi.org/10.1038/s41467-019-14052-x Article at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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book article

DNA chip for mutation analysisMetspalu, A.; Shumaker, J.M.BIOBALT '96 : Biotechnology in Estonia, Latvia and Lithuania : International Workshop, 19-20 April, 1996, Tartu, Estonia : abstract book1996 / p. 27

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dissertation

Functions of the basic helix-loop-helix transcription factor TCF4 in health and disease = Aluselise heeliks-ling-heeliks transkriptsioonifaktori TCF4 funktsioonid ja seosed haigustegaSepp, Mari2012

dissertation

mutatsioonid (subject term)

types of item

subject term 2