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book article

Analysis of maize meiotic mutants to fix heterosisRonceret, Arnaud; Golubovskaya, Inna; Timofejeva, Ljudmilla58th Annual Maize Genetics Conference : program and abstracts : March 17 - March 20, 2016, Hyatt Regency, Jacksonville, Florida2016 / p. 42 http://maizegdb.org/maize_meeting/abstracts/2016Program.pdf

book article

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dissertation

Application of 13C and fluorescence labeling in metabolic studies of Saccharomyces sppNisamedtinov, Ildar2006 https://digi.lib.ttu.ee/i/?91 https://www.ester.ee/record=b2195814*est

dissertation

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journal article EST / journal article ENG

Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer (Nature Communications, (2020), 11, 1, (733), 10.1038/s41467-019-13824-9)Sieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7574 http://doi.org/10.1038/s41467-022-32328-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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journal article EST / journal article ENG

Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)Zhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7572 http://doi.org/10.1038/s41467-022-32333-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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journal article EST / journal article ENG

Author Correction: Inferring structural variant cancer cell fraction (Nature Communications, (2020), 11, 1, (730), 10.1038/s41467-020-14351-8)Cmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2022 / Art. n.r 7568 http://doi.org/10.1038/s41467-022-32338-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7566 http://doi.org/10.1038/s41467-022-32334-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig (Nature Communications, (2020), 11, 1, (731), 10.1038/s41467-020-14352-7)Rubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7567 http://doi.org/10.1038/s41467-022-32336-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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journal article EST / journal article ENG

Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)Bailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 6232 http://doi.org/10.1038/s41467-020-20128-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesisCarlevaro-Fita, Joan; Lanzós, Andrés; Feuerbach, Lars; Hong, Chen; Mas-Ponte, David; Pedersen, Jakob Skou; Abascal, Federico; Amin, Samirkumar B.; Johnson, Rory; Uusküla-Reimand, LiisCommunications Biology2020 / Art. nr. 56 http://doi.org/10.1038/s42003-019-0741-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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book article

Cellular localization of cocksfoot mottle sobemovirus (CfMV) proteinsTruve, Erkki; Meier, Merike; Paves, Heiti; Olspert, Allan; Toomela, Raavo; Tamm, T.XIIth International Congress of Virology2002 / p. 303

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dissertation

Cocksfoot mottle virus : the genome organisation and translational strategiesTamm, Tiina2000 http://www.ester.ee/record=b1060777*est

dissertation

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journal article EST / journal article ENG

Combined burden and functional impact tests for cancer driver discovery using DriverPowerShuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 734 http://doi.org/10.1038/s41467-019-13929-1 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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journal article

CRISPR/Cas-mediated plant genome editing : outstanding challenges a decade after implementationCardi, Teodoro; Murovec, Jana; Bakhsh, Allah; Boniecka, Justyna; Bruegmann, Tobias; Bull, Simon E.; Eeckhaut, Tom; Fladung, Matthias; Galovic, Vladislava; Linkiewicz, Anna; Lukan, Tjaša; Mafra, Isabel; Michalski, Krzysztof; Kavas, Musa; Nicolia, Alessandro; Nowakowska, Justyna; Sagi, Laszlo; Sarmiento Guerin, Maria Cecilia; Yıldırım, Kubilay; Zlatkovic, Milica; Hensel, Goetz; Van Laere, KatrijnTrends in plant science2023 https://doi.org/10.1016/j.tplants.2023.05.012

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journal article

Draft genome sequence of a new pseudomonas sp. strain, ef1, associated with the psychrophilic Antarctic Ciliate Euplotes focardiiRamasamy, Kesava Priyan; Telatin, Andrea; Mozzicafreddo, Matteo; Miceli, Cristina; Pucciarelli, SandraMicrobiology resource announcements2019 / art. e00867-19, 2 p http://dx.doi.org/10.1128/MRA.00867-19

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journal article

gapFinisher : A reliable gap filling pipeline for SSPACE-LongRead scaffolder outputKammonen, Juhana I.; Smolander, Olli-Pekka; Paulin, LarsPLoS ONE2019 / art. e0216885, 21 p. : ill http://dx.doi.org/10.1371/journal.pone.0216885

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journal article EST / journal article ENG

Genome description of Phlebia radiata 79 with comparative genomics analysis onlignocellulose decomposition machinery of phlebioid fungiMäkinen, Mari; Kuuskeri, Jaana; Laine, Pia; Smolander, Olli-PekkaBMC genomics2019 / art. 430, 22 p. : ill https://doi.org/10.1186/s12864-019-5817-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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journal article EST / journal article ENG

Genomic footprints of activated telomere maintenance mechanisms in cancerSieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2020 / art. 733 http://doi.org/10.1038/s41467-019-13824-9 Journal metrics at Scopus Article at Scopus Journal metrics at wOS Article at WOS

journal article EST / journal article ENG

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journal article EST / journal article ENG

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterationsZhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 736 http://doi.org/10.1038/s41467-019-13885-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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journal article

Identification of the genome-linked protein in virions of Potato virus A, with comparison to other members in genus PotyvirusOruetxebarria, I.; Guo, D.; Merits, Andres; Mäkinen, K.; Saarma, Mart; Valkonen, J.P.Virus research2001 / p. 103-112

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journal article

Improved chromosome level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) based on SMRT Sequencing and linkage mapBlande, Daniel; Smolander, Olli-Pekka; Ahola, VirpibioRxiv2020 / 32 p https://doi.org/10.1101/2020.11.03.364950

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journal article

Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage mapSmolander, Olli-Pekka; Blande, Daniel; Ahola, Virpi; Rastas, Pasi; Tanskanen, Jaakko; Kammonen, Juhana I.; Oostra, Vicencio; Pellegrini, Lorenzo; Ikonen, Suvi; Dallas, TadGigaScience2022 / art. giab097 https://doi.org/10.1093/gigascience/giab097

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journal article

Improving abiotic stress tolerance of forage grasses - prospects of using genome editingSustek-Sanchez, Ferenz; Rognli, Odd Arne; Rostoks, Nils; Sõmera, Merike; Jaškune, Kristina; Kovi, Mallikarjuna Rao; Statkevičiute, Gražina; Sarmiento Guerin, Maria CeciliaFrontiers in plant science2023 / art. 1127532 http://doi.org/10.3389/fpls.2023.1127532

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journal article EST / journal article ENG

Inferring structural variant cancer cell fractionCmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 730 http://doi.org/10.1038/s41467-020-14351-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Aricle at WOS

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book article

In-silico identification and characterization of wheat 4AL - Triticum militinae IntrogressionAbrouk, Michael; Jakobson, Irena; Järve, KadriXXII International Plant & Animal Genome Conference : January 10-14, 2014, San Diego, CA, USA : [abstracts]2014 / p. P214

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newspaper article

Kommentaar raportile „Genome Editing for Crop Improvement“ (Genoomi täppismuutmine põllukultuuri parendamiseks). ALLEA Symposium Report. October 2020Sarmiento Guerin, Maria CeciliaEesti Teaduste Akadeemia veebileht2020 / 1 lk https://www.akadeemia.ee/wp-content/uploads/2020/12/kommentaar-final.pdf

newspaper article

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