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C/N ratio and carbon source-dependent lipid production profiling in Rhodotorula toruloidesLopes, Helberth Júnnior Santos; Bonturi, Nemailla; Kerkhoven, Eduard Johannes; Miranda, Everson Alves; Lahtvee, Petri-JaanApplied Microbiology and Biotechnology2020 / p. 2639 - 2649 https://doi.org/10.1007/s00253-020-10386-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Characterization of potassium, sodium and their interactions effects in yeastsIllarionov, Aleksandr; Lahtvee, Petri-Jaan; Kumar, Rahul, 1978-bioRxiv2020 / 16 p. : ill https://doi.org/10.1101/2020.10.22.350355

A conundrum of r-protein stability : unbalanced stoichiometry of r-proteins during stationary phase in Escherichia coliReier, Kaspar; Lahtvee, Petri-Jaan; Liiv, Aivar; Remme, JaanusmBio2022 / art. e01873-22 : ill https://doi.org/10.1128/mbio.01873-22 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides sppKattel, Anna; Morell, Indrek; Aro, Valter; Lahtvee, Petri-Jaan; Vilu, Raivo; Jõers, Arvi; Nahku, RannoAnaerobe2023 https://doi.org/10.1016/j.anaerobe.2022.102680

Development of a dedicated Golden Gate Assembly Platform (RtGGA) for Rhodotorula toruloidesBonturi, Nemailla; Pinheiro, Marina Julio; Oliveira, Paola Monteiro de; Rusadze, Eka; Eichinger, Tobias; Liudžiute, Gintare; De Biaggi, Juliano Sabedotti; Brauer, Age; Remm, Maido; Miranda, Everson Alves; Ledesma-Amaro, Rodrigo; Lahtvee, Petri-JaanMetabolic engineering communications2022 / art. e00200 https://doi.org/10.1016/j.mec.2022.e00200 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Evaluating the impact of toxicities in hemicellulosic hydrolysates during biotechnological valorisation processesLipova, Inna; Axelrud Nunes, Andreia; Bonturi, Nemailla; Lahtvee, Petri-JaanConference materials “Youth and modern problems of microbiology and virology” : 
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Evaluation of enzyme-constrained genome-scale model through metabolic engineering of anaerobic co-production of 2,3-butanediol and glycerol by Saccharomyces cerevisiaeSjöberg, Gustav; Reķena, Alina; Fornstad, Matilda; Lahtvee, Petri-Jaan; Van Maris, Antionius J. A.Metabolic engineering2024 / p. 49-59 https://doi.org/10.1016/j.ymben.2024.01.007

Fat-making microbes for greener and sustainable industryShapava, Volha; Lahtvee, Petri-Jaan; Blomqvist, Johanna; Passoth, Volkmar; Bonturi, Nemailla; Einarsson, Hjörleifur; Sigurðarson, Jens J.; Skugor, Stanko; Varland, MaritFast track to vision 20302023 / p. 112-115 https://www.nordforsk.org/2023/fast-track-vision-2030

Genome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloidesReķena, Alina; Pinheiro, Marina J.; Bonturi, Nemailla; Belouah, Isma; Tammekivi, Eliise; Herodes, Koit; Kerkhoven, Eduard J.; Lahtvee, Petri-JaanPLoS computational biology2023 / art. e1011009 https://doi.org/10.1371/journal.pcbi.1011009

Genome-scale modelling-based discovery of metabolic strategies in oleaginous yeast Rhodotorula toruloidesReķena, Alina; Pinheiro, Marina J.; Bonturi, Nemailla; Belouah, Isma; Tammekivi, Eliise; Herodes, Koit; Kerkhoven, Eduard J.; Lahtvee, Petri-Jaan8th conference on physiology of yeasts and filamentous fungi (PYFF8) : abstract book2023 / p. 47-48 https://efbiotechnology.org/images/uploads/PYFF8_Abstract_book.pdf

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Metabolic engineering of Rhodotorula toruloides for astaxanthin production using Golden Gate Assembly PlatformLipova, Inna; Gavrilovic, Srdjan; Bonturi, Nemailla; Lahtvee, Petri-JaanYeast 2023 : ICYGMB31 : 31st International Conference on Yeast Genetics and Molecular Biology, Florence, Italy, 20-25 august, 2023 : Book of abstracts2023 / p. 257 https://files.spazioweb.it/ed/08/ed0856fe-fa38-4015-93c9-561144f5b608.pdf

Metabolism control in 3D-printed living materials improves fermentationButelmann, Tobias; Priks, Hans; Parent, Zoel; Johnston, Trevor G.; Tamm, Tarmo; Nelson, Alshakim; Lahtvee, Petri-Jaan; Kumar, Rahul, 1978-ACS Applied Bio Materials2021 / p. 7195-7203 https://doi.org/10.1021/acsabm.1c00754 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Multi-omics approach to study the growth efficiency and amino acid metabolism in Lactococcus lactis at various specific growth ratesLahtvee, Petri-Jaan; Adamberg, Kaarel; Arike, Liisa; Nahku, Ranno; Aller, Kadri; Vilu, RaivoMicrobial cell factories2011 / Article no. 12

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Physical confinement impacts cellular phenotypes within living materialsPriks, Hans; Butelmann, Tobias; Illarionov, Aleksandr; Johnston, Trevor G.; Fellin, Christopher; Tamm, Tarmo; Nelson, Alshakim; Kumar, Rahul, 1978-; Lahtvee, Petri-JaanACS Applied Bio Materials2020 / p. 4273 - 4281 https://doi.org/10.1021/acsabm.0c00335 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Potassium and sodium salt stress characterization in the yeasts Saccharomyces cerevisiae, Kluyveromyces marxianus, and Rhodotorula toruloidesIllarionov, Aleksandr; Lahtvee, Petri-Jaan; Kumar, Rahul, 1978-Applied and Environmental Microbiology2021 / art. e03100-20 https://doi.org/10.1128/AEM.03100-20 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

Protein turnover forms one of the highest maintenance costs in Lactococcus lactisLahtvee, Petri-Jaan; Seiman, Andrus; Arike, Liisa; Adamberg, Kaarel; Vilu, RaivoMicrobiology2014 / p.1501-1512 : ill

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Quasi steady state growth of Lactococcus lactis in glucose-limited acceleration stat (A-stat) culturesAdamberg, Kaarel; Lahtvee, Petri-Jaan; Valgepea, Kaspar; Abner, Kristo; Vilu, RaivoAntonie van Leeuwenhoek2009 / 3, p. 219-226 https://pubmed.ncbi.nlm.nih.gov/19184516/

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Screening and growth characterization of non-conventional yeasts in a hemicellulosic hydrolysateMonteiro de Oliveira, Paola; Aborneva, Daria; Bonturi, Nemailla; Lahtvee, Petri-JaanFrontiers in bioengineering and biotechnology2021 / art. 659472 https://doi.org/10.3389/fbioe.2021.659472

Specific growth rate dependent transcriptiome profiling of Escherichia coli K12 MG1655 in accelerostat culturesNahku, Ranno; Valgepea, Kaspar; Lahtvee, Petri-Jaan; Erm, Sten; Abner, Kristo; Adamberg, Kaarel; Vilu, RaivoJournal of biotechnology2010 / 1, p. 60-65

Steady state growth space study of Lactococcus lactis in D-stat culturesLahtvee, Petri-Jaan; Valgepea, Kaspar; Nahku, Ranno; Abner, Kristo; Adamberg, Kaarel; Vilu, RaivoAntonie van Leeuwenhoek2009 / 4, p. 487-496

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Systems biology approach reveals that overflow metabolism of acetate in Escheria coli is triggered by carbon catabolite repression of acetyl-CoA synthetaseValgepea, Kaspar; Adamberg, Kaarel; Nahku, Ranno; Lahtvee, Petri-Jaan; Arike, Liisa; Vilu, RaivoBMC systems biology2010 / p. 166

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Thermodynamics-based model-driven discovery of metabolic strategies in oleaginous yeast Rhodotorula toruloidesReķena, Alina; Smith, Edward N.; Heinemann, Matthias; Lahtvee, Petri-JaanMetabolic Engineering 15 (ME15) : conference proceedings2023 / Art. 52 https://aiche.confex.com/aiche/me15/meetingapp.cgi/Paper/659438

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