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Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategiesRollin, Johan; Bester, Rachelle; Brostaux, Yves; Caglayan, Kadriye; De Jonghe, Kris; Eichmeier, Ales; Foucart, Yoika; Haegeman, Annelies; Koloniuk, Igor; Kominek, Petr; Maree, Hans; Onder, Serkan; Posada Cespedes, Susana; Roumi, Vahid; Šafarova, Dana; Schumpp, Olivier; Ulubas Serce, Cigdem; Sõmera, Merike; Tamisier, Lucie; Vainio, Eeva; van der Vlugt, Rene AA; Massart, SebastienPeerJ2023 / art. e15816 https://doi.org/10.7717/peerj.15816 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Dissolution of silver nanowires and nanospheres dictates their toxicity to escherichia coliVisnapuu, Meeri; Joost, Urmas; Juganson, Katre; Künnis-Beres, Kai; Kahru, Anne; Kisand, Vambola; Ivask, AngelaBioMed Research International2013 / art. 819252 https://doi.org/10.1155/2013/819252 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Divergent mutational processes distinguish hypoxic and normoxic tumoursBhandari, Vinayak; Li, Constance H.; Bristow, Robert G.; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2020 / art. 737, 10 p. : ill https://doi.org/10.1038/s41467-019-14052-x Article at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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ELIMÄKI Locus is required for vertical proprioceptive response in birch treesAlonso-Serra, Juan; Shi, Xueping; Peaucelle, Alexis; Smolander, Olli-PekkaCurrent biology : CB2020 / p. 589-599 https://doi.org/10.1016/j.cub.2019.12.016 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Erratum to: Long-haul optical transmission link using low-noise phase-sensitive amplifiers (Nature Communications, (2018), 9, 1, (2513), 10.1038/s41467-018-04956-5)Olsson, Samuel L. I.; Eliasson, Henrik; Astra, Egon; Karlsson, Magnus; Andrekson, Peter A.Nature Communications2018 / Art. nr. 3064 https://doi.org/10.1038/s41467-018-05591-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS

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EUKARYOME: the rRNA gene reference database for identification of all eukaryotesTedersoo, Leho; Hosseyni-Moghaddam, Mahdieh S.; Mikryukov, Vladimir; Hakimzadeh, Ali; Bahram, Mohammad; Nilsson, Rolf Henrik; Yatsiuk, Iryna; Geisen, Stefan; Schwelm, Arne; Piwosz, Kasia; Prous, Marko; Sildvee, Sirje; Laas, PeeterDatabase2024 / art. baae043 https://doi.org/10.1093/database/baae043 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney functionPattaro, Cristian; Teumer, Alexander; Gorski, Mathias; Chu, Audrey Y.; Li, Man; Mijatovic, Vladan; Garnaas, Maija; Tin, Adrienne; Sorice, Rossella; Li, Yong; Viigimaa, MargusNature Communications2016 / art. 10023 https://doi.org/10.1038/ncomms10023 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Genomic footprints of activated telomere maintenance mechanisms in cancerSieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2020 / art. 733, 13 p. ill https://doi.org/10.1038/s41467-019-13824-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Globally invariant metabolism but density-diversity mismatch in springtailsPotapov, Anton M.; Guerra, Carlos A.; van den Hoogen, Johan; Babenko, Anatoly; Bellini, Bruno C.; Berg, Matty P.; Chown, Steven L.; Deharveng, Louis; Ivask, Mari; Kuu, AnnelyNature communications2023 / art. 674, 13 p. : ill., map https://doi.org/10.1038/s41467-023-36216-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterationsZhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 736 https://doi.org/10.1038/s41467-019-13885-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Horizontal or vertical? Windows' layout selection for shading devices optimizationDe Luca, Francesco; Voll, Hendrik; Thalfeldt, MartinManagement of environmental quality : an international journal2016 / p. 623-633 : ill https://doi.org/10.1108/MEQ-05-2015-0102 Journal metrics at Scopus Article at Scopus

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Identification of two highly antigenic epitope markers predicting multiple sclerosis in optic neuritis patientsSadam, Helle; Pihlak, Arno; Jaago, Mariliis; Pupina, Nadežda; Rähni, Annika; Toots, Maarja; Vaheri, Antti; Nieminen, Janne K.; Siuko, Mika; Tienari, Pentti J.; Palm, KaiaEBioMedicine2021 / art. 103211, 8 p https://doi.org/10.1016/j.ebiom.2021.103211 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Immunodominant antibody epitopes associated with the development of multiple sclerosis and type 1 narcolepsy – a next-generation phage-display analysis = Hulgiskleroosi ja tüüp-1 narkolepsiaga seotud immunodomineerivate epitoopide analüüs järgmise põlvkonna faagidisplei abil

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Immune response to a conserved enteroviral epitope of the major capsid VP1 protein is associated with lower risk of cardiovascular diseasePupina, Nadežda; Avarlaid, Annela; Sadam, Helle; Pihlak, Arno; Jaago, Mariliis; Tuvikene, Jürgen; Rähni, Annika; Planken, Anu; Planken, Margus; Kalso, Eija; Tienari, Pentti J.; Nieminen, Janne K.; Seppänen, Mikko R.J.; Vaheri, Antti; Lindholm, Dan; Sinisalo, Juha; Pussinen, Pirkko; Timmusk, Tõnis; Palm, KaiaeBioMedicine2022 / art. 103835, 14 p. : ill https://doi.org/10.1016/j.ebiom.2022.103835 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Improving taxonomic classification of marine zooplankton by molecular approach: registration of taxonomically verified 18S and 28S rRNA gene sequencesWatanabe, Tsuyoshi; Hirai, Junya; Sildever, Sirje; Tadokoro, Kazuaki; Hidaka, Kiyotaka; Tanita, Iwao; Nishiuchi, Koh; Iguchi, Naoki; Kasai, Hiromi; Nishi, Noriko; Katakura, Seiji; Taniuchi, Yukiko; Kodama, Taketoshi; Tashiro, Satokuni; Nakae, Misato; Okazaki, Yuji; Kitajima, Satoshi; Sogawa, Sayak; Hasegawa, Toru; Azumaya, Tomonori; Hiroe, Yutaka; Ambe, Daisuke; Setou, Takashi; Ito, Daiki; Kusaka, Akira; Okunishi, Takeshi; Tanaka, Takahiro; Kuwata, Akira; Hasegawa, Daisuke; Kakehi, Shigeho; Shimizu, Yugo; Nagai, SatoshPeerJ2023 / art. e15427 https://doi.org/10.7717/peerj.15427 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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In-depth analysis of transcriptomes in ovarian cortical follicles from children and adults reveals interfollicular heterogeneityRooda, Ilmatar; Hassan, Jasmin; Hao, Jie; Wagner, Magdalena; Moussaud-Lamodiere, Elisabeth; Jääger, Kersti; Otala, Marjut; Knuus, Katri; Lindskog, Cecilia; Velthut-Meikas, AgneNature communications2024 / art. 6989 https://doi.org/10.1038/s41467-024-51185-0 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Inferring structural variant cancer cell fractionCmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 730 https://doi.org/10.1038/s41467-020-14351-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Aricle at WOS

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Inhibition of pyruvate dehydrogenase kinase influence microbiota and metabolomic profile in pancreatic cancer xenograft miceAdamberg, Kaarel; Vilu, Raivo; Pazienza, ValerioBMC Research Notes2020 / art. 540 https://doi.org/10.1186/s13104-020-05384-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Integrative pathway enrichment analysis of multivariate omics dataPaczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 735 https://doi.org/10.1038/s41467-019-13983-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Introducing Pitt-Hopkins syndrome-associated mutations of TCF4 to Drosophila daughterlessTamberg, Laura; Sepp, Mari; Timmusk, Tõnis; Palgi, MariBiology open2015 / p. 1762-1771 : ill https://doi.org/10.1242/bio.014696 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Studies of the Drosophila basic helix-loop-helix transcription factor Daughterless and its mammalian homologue Transcription factor 4 = Äädikakärbse aluselise heeliks-ling-heeliks transkriptsioonifaktori Daughterless ja tema imetaja homoloogi Transkriptsioonifaktor 4 uuringud

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Intronic enhancer region governs transcript-specific Bdnf expression in rodent neuronsTuvikene, Jürgen; Esvald, Eli-Eelika; Rähni, Annika; Uustalu, Kaie; Zhuravskaya, Anna; Avarlaid, Annela; Makeyev, Eugene V.; Timmusk, TõniseLife2021 / art. e65161 https://doi.org/10.7554/eLife.65161 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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IOCBIO Kinetics : an open-source software solution for analysis of data tracesVendelin, Marko; Laasmaa, Martin; Kalda, Mari; Branovets, Jelena; Karro, Niina; Barsunova, Karina; Birkedal Nielsen, RikkePLoS computational biology2020 / art. e1008475 https://doi.org/10.1371/journal.pcbi.1008475 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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IOCBIO Sparks detection and analysis softwareLaasmaa, Martin; Karro, Niina; Birkedal Nielsen, Rikke; Vendelin, MarkoPeerJ2019 / art. e6652, 28 p. : ill https://doi.org/10.7717/peerj.6652 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Lithium ions display weak interaction with amyloid-beta (Aβ) peptides and have minor effects on their aggregationBerntsson, Elina; Paul, Suman; Vosough, Faraz; Sholts, Sabrina B.; Jarvet, Jüri; Roos, Per M.; Barth, Andreas; Gräslund, Astrid; Wärmländer, Sebastian K.T.S.Acta biochimica Polonica2021 / p. 169-179 https://doi.org/10.18388/abp.2020_5493 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Long-haul optical transmission link using low-noise phase-sensitive ampliﬁersOlsson, Samuel L. I.; Eliasson, Henrik; Astra, Egon; Karlsson, Magnus; Andrekson, Peter AvoNature communications2018 / art. 2513, 7 p. : ill https://doi.org/10.1038/s41467-018-04956-5 Eesti 27 aastat internetis välismaailmaga: teadlaste uus andmeedastustehnoloogia Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Molecular aspects of the isolated limb infusion procedureTeras, Jüri; Carr, Michael J.; Zager, Jonathan S.; Kroon, Hidde M.Biomedicines2021 / art. 163, 13 p. : ill https://doi.org/10.3390/biomedicines9020163 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Biochemistry, genetics and molecular biology. General biochemistry, genetics and molecular biology (category)

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