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Proteome reallocation in Escherichia coli with increasing specific growth ratePeebo, Karl; Valgepea, Kaspar; Maser, Andres; Nahku, Ranno; Adamberg, Kaarel; Vilu, RaivoMolecular biosystems2015 / p. 1184-1193 : ill https://doi.org/10.1039/c4mb00721b Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic referencesPool, Allan-Hermann; Poldsam, Helen; Chen, Sisi; Thomson, Matt; Oka, YukiNature Methods2023 / p. 1506 - 1515 https://doi.org/10.1038/s41592-023-02003-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Research resource : small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genesVelthut, Agne; Simm, Jaak; Tuuri, Timo; Tapanainen, Juha S.; Metsis, Madis; Salumets, AndresMolecular endocrinology2013 / p. 1128-1141 : ill https://doi.org/10.1210/me.2013-1058 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Restricted ADP movement in cardiomyocytes : cytosolic diffusion obstacles are complemented with a small number of open mitochondrial voltage-dependent anion channelsSimson, Päivo; Jepihhina, Natalja; Laasmaa, Martin; Peterson, Pearu; Birkedal Nielsen, Rikke; Vendelin, MarkoJournal of molecular and cellular cardiology2016 / p. 197-203 : ill https://doi.org/10.1016/j.yjmcc.2016.04.012 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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105

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Revealing calcium fluxes by analyzing inhibition dynamics in action potential clampLaasmaa, Martin; Birkedal Nielsen, Rikke; Vendelin, MarkoJournal of molecular and cellular cardiology2016 / p. 93-108 : ill https://doi.org/10.1016/j.yjmcc.2016.08.015 Journal metrics at Scopus Article at Scopus Article at WOS

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106

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Revisiting the expression of BDNF and its receptors in mammalian developmentEsvald, Eli-Eelika; Tuvikene, Jürgen; Kiir, Carl Sander; Avarlaid, Annela; Tamberg, Laura; Sirp, Alex; Shubina, Anastassia; Cabrera-Cabrera, Florencia; Pihlak, Arno; Koppel, Indrek; Palm, Kaia; Timmusk, TõnisFrontiers in Molecular Neuroscience2023 / art. 1182499 https://doi.org/10.3389/fnmol.2023.1182499 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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107

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Revisiting the origins of the Sobemovirus genus: A case for ancient origins of plant virusesGhafari, Mahan; Sõmera, Merike; Sarmiento Guerin, Maria Cecilia; Niehl, Annette; Hebrard, Eugenie; Tsoleridis, Theocharis; Ball, Jonathan; Moury, Benoit; Lemey, Philippe; Katzourakis, Aris; Fargette, DenisPLoS Pathogens2024 / art. e1011911 https://doi.org/10.1371/journal.ppat.1011911 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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108

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Safeguarding female reproductive health against endocrine disrupting chemicals-The FREIA projectDuursen, Majorie B.M. van; Boberg, Julie; Christiansen, Sofie; Jääger, Kersti; Salumets, Andres; Velthut-Meikas, AgneInternational journal of molecular sciences2020 / art. 3215 https://doi.org/10.3390/ijms21093215 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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109

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SciPy 1.0 : fundamental algorithms for scientific computing in PythonVirtanen, Pauli; Gommers, Ralf; Oliphant, Travis E.; Haberland, Matt; Reddy, Tyler; Cournapeau, David; Burovski, Evgeni; Peterson, PearuNature methods2020 / p. 261-272 https://doi.org/10.1038/s41592-019-0686-2 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Related publications 1

Author Correction: SciPy 1.0 : fundamental algorithms for scientific computing in Python (Nature Methods, (2020), 17, 3, (261-272), 10.1038/s41592-019-0686-2)

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Secretome profiling reveals virulence-associated proteins of Fusarium proliferatum during interaction with banana fruitLi, Taotao; Wu, Yu; Wang, Yong; Gao, Haiyan; Gupta, Vijai Kumar; Duan, Xuewu; Qu, Hongxia; Jiang, YuemingBiomolecules2019 / Art. nr. 246 https://doi.org/10.3390/biom9060246 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Serum levels and removal by haemodialysis and haemodiafiltration of tryptophan-derived uremic toxins in ESKD patientsPaats, Joosep; Adoberg, Annika; Arund, Jürgen; Fridolin, Ivo; Leis, Liisi; Luman, Merike; Pilt, Kristjan; Uhlin, Nils Fredrik ArneInternational journal of molecular sciences2020 / art. 1522, 19 p. : ill https://doi.org/10.3390/ijms21041522 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Spermatozoa induce transcriptomic alterations in bovine oviductal epithelial cells prior to initial contactReshi, Qurat Ul Ain; Viil, Janeli; Ord, James; Lättekivi, Freddy; Godakumara, Kasun; Hasan, Mohammed Mehedi; Nõmm, Monika; Jääger, Kersti; Velthut-Meikas, Agne; Jaakma, Ülle; Salumets, Andres; Fazeli, AlirezaJournal of cell communication and signaling2020 / p. 439–451 https://doi.org/10.1007/s12079-020-00575-2 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Structural and catalytic insights into the algal prostaglandin H synthase reveal atypical features of the first non-animal cyclooxygenaseVarvas, Külliki; Kasvandik, Sergo; Hansen, Kristella; Järving, Ivar; Morell, Indrek; Samel, NigulasBiochimica et biophysica acta : molecular and cell biology of lipids2013 / p. 863-871 : ill https://doi.org/10.1016/j.bbalip.2012.11.010 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Structure of a bacterial ice binding protein with two faces of interaction with iceMangiagalli, Marco; Sarusi, Guy; Kaleda, Aleksei; Bar Dolev, MayaThe FEBS journal2018 / p. 1653-1666 : ill https://doi.org/10.1111/febs.14434 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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TAC-seq : targeted DNA and RNA sequencing for precise biomarker molecule countingTeder, Hindrek; Koel, Mariann; Paluoja, Priit; Velthut-Meikas, Agnenpj genomic medicine2018 / art. 34, 8 p. : ill https://doi.org/10.1038/s41525-018-0072-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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The glycine arginine-rich domain of the RNA-binding protein nucleolin regulates its subcellular localizationDoron-Mandel, Ella; Koppel, Indrek; Abraham, Ofri; Rishal, IdaThe EMBO Journal2021 / art. e107158 https://doi.org/10.15252/embj.2020107158 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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The initiation of free radical peroxidation of low-density lipoproteins by glucose and its metabolite methylglyoxal: A common molecular mechanism of vascular wall injure in atherosclerosis and diabetesLankin, Vadim Z.; Konovalova, Galina G.; Tikhaze, Alla K.; Shumaev, Konstantin; Kumskova, Elena; Viigimaa, MargusMolecular and cellular biochemistry2014 / p. 241-252 : ill https://doi.org/10.1007/s11010-014-2131-2 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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The role of initial oligomers in amyloid fibril formation by human stefin BTaler-Verčič, Ajda; Kirsipuu, Tiina; Friedemann, Merlin; Noormägi, Andra; Smirnova, Julia; Palumaa, PeepInternational journal of molecular sciences2013 / p. 18362-18384 : ill https://doi.org/10.3390/ijms140918362 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Therapeutic potential of the endoplasmic reticulum located and secreted CDNF/MANF family of neurotrophic factors in Parkinson's diseaseVoutilainen, Merja H.; Arumäe, Urmas; Airavaara, Mikko; Saarma, MartFEBS letters2015 / p. 3739-3748 : ill https://doi.org/10.1016/j.febslet.2015.09.031 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Thermal stability of red algal galactans: Effect of molecular structure and counterionsRobal, Marju; Truus, Kalle; Volobujeva, Olga; Mellikov, Enn; Tuvikene, RandoInternational journal of biological macromolecules2017 / p. 213-223 : ill https://doi.org/10.1016/j.ijbiomac.2017.05.175 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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The TIMELESS roles in genome stability and beyondVipat, Sameera Anant; Moiseeva, TatianaJournal of molecular biology2024 / art. 168206, 14 p. : ill https://doi.org/10.1016/j.jmb.2023.168206 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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The roles of TIMELESS protein and DNA polymerase epsilon in DNA replication initiation in human cells = TIMELESS valgu ja DNA polümeraas epsiloni rollid DNA replikatsiooni initsiatsioonis inimese rakkudes

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Toxicity screening of fungal extracts and metabolites, xenobiotic chemicals, and indoor dusts with in vitro and ex vivo bioassay methodsHintikka, Tuomas; Andersson, Maria A.; Lundell, Taina; Marik, Tamas; Kredics, Laszlo; Mikkola, Raimo; Andersson, Magnus C.; Kurnitski, Jarek; Salonen, HeidiPathogens2024 / art. 217 https://doi.org/10.3390/pathogens13030217 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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uCARE Chem Suite and uCAREChemSuiteCLI : tools for bacterial resistome predictionSaha, Saurav Bhaskar; Gupta, Vijai Kumar; Ramteke, Pramod WasudeoGenes and Diseases2021 / p. 721 - 729 https://doi.org/10.1016/j.gendis.2020.06.008 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Untranslated regions of brain-derived neurotrophic factor (Bdnf) mRNA control its translatability and subcellular localizationLekk, Ingrid; Cabrera-Cabrera, Florencia; Turconi, Giorgio; Tuvikene, Jürgen; Esvald, Eli-Eelika; Rähni, Annika; Casserly, Laoise; Garton, Daniel R.; Andressoo, Jaan-Olle; Timmusk, Tõnis; Koppel, IndrekThe journal of biological chemistry2023 / art. 102897 https://doi.org/10.1016/j.jbc.2023.102897 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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An upstream enhancer and MEF2 transcription factors fine-tune the regulation of the Bdnf gene in cortical and hippocampal neuronsAvarlaid, Annela; Falkenberg, Kaisa; Lehe, Karin; Mudo, Giuseppa; Belluardo, Natale; Di Liberto, Valentina; Frinchi, Monica; Tuvikene, Jürgen; Timmusk, TõnisJournal of biological chemistry2024 / art. 107411, 12 p. : ill https://doi.org/10.1016/j.jbc.2024.107411 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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The role of Enhancers in the regulation of brain-derived neurotrophic factor transcription = Enhanseralade roll aju-päritolu neurotroofse teguri transkriptsiooni regulatsioonis

Biochemistry, genetics and molecular biology. Molecular biology (category)

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keyword 51