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DOME : recommendations for supervised machine learning validation in biologyWalsh, Ian; Fishman, Dmytro; Garcia-Gasulla, Dario; Titma, Tiina; Pollastri, Gianluca; Harrow, Jennifer; Psomopoulos, Fotis E.; Tosatto, Silvio C. E.Nature methods2021 / p. 1122–1127 https://doi.org/10.1038/s41592-021-01205-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Author Correction : DOME : recommendations for supervised machine learning validation in biology

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Dual ELISA using SARS-CoV-2 N protein produced in E. coli and CHO cells reveals epitope masking by N-glycosylationRump, Airi; Risti, Robert; Kristal, Mai-Ly; Reut, Jekaterina; Sõritski, Vitali; Lõokene, Aivar; Rüütel Boudinot, SirjeBiochemical and biophysical research communications2021 / p. 457−460 https://doi.org/10.1016/j.bbrc.2020.11.060 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Evidence for two distinct binding sites for lipoprotein lipase on glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 (GPIHBP1)Reimund, Mart; Larsson, Mikael; Kovrov, Oleg; Kasvandik, Sergo; Olivecrona, Gunilla; Lõokene, AivarJournal of biological chemistry2015 / p. 13919-13934 : ill https://doi.org/10.1074/jbc.M114.634626 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Expression of FLNa in human melanoma cells regulates the function of integrin α1β1 and phosphorylation and localisation of PKB/AKT/ERK1/2 kinasesKrebs, Kristi; Ruusmann, Anu; Simonlatser, Grethel; Velling, TeetEuropean Journal of Cell Biology2015 / p. 564-575 https://doi.org/10.1016/j.ejcb.2015.10.006 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Forkhead transcription factor FOXO3a levels are increased in Huntington disease because of overactivated positive autofeedback loopKannike, Kaja; Sepp, Mari; Zuccato, Chiara; Cattaneo, Elena; Timmusk, TõnisJournal of biological chemistry2014 / p. 32845-32857 : ill https://doi.org/10.1074/jbc.M114.612424 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Formation of highly organized intracellular structure and energy metabolism in cardiac muscle cells during postnatal development of rat heartAnmann, Tiia; Varikmaa, Minna; Timohhina, Natalja; Tepp, Kersti; Shevchuk, Igor; Chekulayev, Vladimir; Saks, Valdur; Kaambre, TuuliBiochimica et biophysica acta - Bioenergetics2014 / p. 1350-1361 : ill https://doi.org/10.1016/j.bbabio.2014.03.015 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Functional consequences of TCF4 missense substitutions associated with Pitt-Hopkins syndrome, mild intellectual disability, and schizophreniaSirp, Alex; Roots, Kaisa; Nurm, Kaja; Tuvikene, Jürgen; Sepp, Mari; Timmusk, TõnisThe journal of biological chemistry2021 / art. 101381 https://doi.org/10.1016/j.jbc.2021.101381 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Molecular characterization of basic helix-loop-helix transcription factor TCF4 : from expression to function = Aluselise heeliks-ling-heeliks transkriptsiooniteguri TCF4 ekspressiooni ja funktsiooni kirjeldamine

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A fungal catalase reacts selectively with the 13S fatty acid hydroperoxide products of the adjacent lipoxygenase gene and exhibits 13S-hydroperoxide-dependent peroxidase activityTeder, Tarvi; Boeglin, William E.; Schneider, Claus; Brash, Alan R.Biochimica et Biophysica Acta (BBA) - molecular and cell biology of lipids2017 / p. 706-715 : ill https://doi.org/10.1016/j.bbalip.2017.03.011 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Glucose impairs aspirin inhibition in platelets through a NAD(P)H oxidase signaling pathwayKobzar, Gennadi; Mardla, Vilja; Samel, NigulasProstaglandins & other lipid mediators2017 / p. 33-40 : ill https://doi.org/10.1016/j.prostaglandins.2017.07.004 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Gly188Arg substitution eliminates substrate inhibition in arachidonate 11R-lipoxygenasePõldemaa, Kaspar; Lipp, Maarja; Järving, Ivar; Samel, Nigulas; Eek, PriitBiochemical and biophysical research communications2019 / p. 81-85 : ill https://doi.org/10.1016/j.bbrc.2019.08.132 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Identification of a small molecule that stabilizes lipoprotein lipase in vitro and lowers triglycerides in vivoLarsson, Mikael; Caraballo, Remi; Lookene, AivarBiochemical and biophysical research communications2014 / p. 1063-1069 : ill https://doi.org/10.1016/j.bbrc.2014.06.114 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Interactome rewiring following pharmacological targeting of BET bomodomainsLambert, Jean-Philippe; Picaud, Sarah; Fujisawa, Takao; Uusküla-Reimand, LiisMolecular cell2019 / p. 621-638.e17 : ill https://doi.org/10.1016/j.molcel.2018.11.006 Jornal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Leptin increases hepatic triglyceride export via a vagal mechanism in humansMetz, Matthäus; Beghini, Marianna; Wolf, Peter; Pfleger, Lorenz; Hackl, Martina; Bastian, Magdalena; Freudenthaler, Angelika; Harreiter, Jürgen; Risti, Robert; Lõokene, AivarCell Metabolism2022 / p. 1719-1731 https://doi.org/10.1016/j.cmet.2022.09.020 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Lipoprotein lipase activity and interactions studied in human plasma by isothermal titration calorimetryReimund, Mart; Kovrov, Oleg; Olivecrona, Gunilla; Lõokene, AivarJournal of lipid research2017 / p. 279-288 : ill https://doi.org/10.1194/jlr.D071787 Journal metrics at Scopus Article at Scopus Journal metric at WOS Article at WOS

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Lipoxygenase-catalyzed transformation of epoxy fatty acids to hydroxy-endoperoxides : a potential P450 and lipoxygenase interactionTeder, Tarvi; Boeglin, William E.; Brash, Alan R.Journal of lipid research2014 / p. 2587-2596 : ill https://doi.org/10.1194/jlr.M054072 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Metallothionein 2A affects the cell respiration by suppressing the expression of mitochondrial protein cytochrome c oxidase subunit IIBragina, Olga; Gurjanova, Karina; Krištal, Jekaterina; Kulp, Maria; Karro, Niina; Tõugu, Vello; Palumaa, PeepJournal of bioenergetics and biomembranes2015 / p. 209-216 : ill https://doi.org/10.1007/s10863-015-9609-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Molecular mechanism of mitoquinol mesylate in mitigating the progression of hepatocellular carcinoma - in silico and in vivo studiesSulaimon, Lateef Adegboyega; Adisa, Rahmat Adetutu; Samuel, Titilola Aderonke; Joel, Ireoluwa Yinka; Ayankojo, Akinrinade George; Abdulkareem, Fatimah Biade; Olaniyi, Timothy OlajireJournal of Cellular Biochemistry2021 / p. 1157-1172 https://doi.org/10.1002/jcb.29937 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Multiple mechanisms repress N-Bak mRNA translation in the healthy and apoptotic neuronsJakobson, Madis; Jakobson, Maili; Llano, Olaya; Palgi, Jaan; Arumäe, UrmasCell Death and Disease2013 / art. e777 https://doi.org/10.1038/cddis.2013.297 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Oxidation of C18 hydroxy‑polyunsaturated fatty acids to epoxide or ketone by catalase‑related hemoproteins activated with iodosylbenzeneTeder, Tarvi; Boeglin, William E.; Brash, Alan R.Lipids2017 / p. 587-597 : ill https://doi.org/10.1007/s11745-017-4271-0 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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P75 neurotrophin receptor signaling activates sterol regulatory element-binding protein-2 in hepatocyte cells via p38 mitogen-activated protein kinase and caspase-3Pham, Dan Duc; Do, Hai Thi; Bruelle, Céline; Kukkonen, Jyrki P.; Eriksson, Ove; Mogollón, Isabel; Korhonen, Laura T.; Arumäe, Urmas; Lindholm, DanJournal of Biological Chemistry2016 / p. 10747 - 10758 https://doi.org/10.1074/jbc.M116.722272 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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A PDZ-like domain mediates the dimerization of 11R-lipoxygenaseEek, Priit; Põldemaa, Kaspar; Kasvandik, Sergo; Järving, Ivar; Samel, NigulasBiochimica et Biophysica Acta (BBA) - molecular and cell biology of lipids2017 / p. 1121-1128 : ill https://doi.org/10.1016/j.bbalip.2017.07.012 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Plexin-B3 suppresses excitatory and promotes inhibitory synapse formation in rat hippocampal neuronsLaht, Piret; Tammaru, Epp; Otsus, Maarja; Rohtla, Johan; Tiismus, Liivi; Veske, AndresExperimental cell research2015 / p. 269-278 : ill https://doi.org/10.1016/j.yexcr.2015.05.007 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Probing determinants of cyclopiazonic acid sensitivity of bacterial Ca 2+-ATPasesKotšubei, Aljona; Gorgel, Manuela; Morth, Jens P.; Nissen, Poul; Andersen, Jacob L.FEBS Journal2013 / p. 5441 - 5449 https://doi.org/10.1111/febs.12310 Journal metrics at Scopus Article at Scopus

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Protein kinase inhibitor SU6668 attenuates positive regulation of Gli proteins in cancer and multipotent progenitor cellsPiirsoo, Alla; Kasak, Lagle; Kauts, Mari-Liis; Uusen, Piia; Tints, Kairit; Loog, Mart; Neuman, Toomas; Piirsoo, MarkoBiochimica et biophysica acta : molecular cell research2014 / p. 703-714 : ill https://doi.org/10.1016/j.bbamcr.2014.01.003 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic referencesPool, Allan-Hermann; Poldsam, Helen; Chen, Sisi; Thomson, Matt; Oka, YukiNature Methods2023 / p. 1506 - 1515 https://doi.org/10.1038/s41592-023-02003-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Biokeemia, geneetika ja molekulaarbioloogia. Rakubioloogia (category)

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