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51

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High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterationsZhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 736 https://doi.org/10.1038/s41467-019-13885-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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52

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Histone variant macroH2A1.1 Enhances nonhomologous end joining-dependent DNA double-strand-break repair and reprogramming efficiency of human iPSCsGiallongo, Sebastiano; Řeháková, Daniela; Biagini, Tommaso; Lo Re, Oriana; Raina, Priyanka; Lochmanová, Gabriela; Zdráhal, Zbyněk; Resnick, Igor; Pata, Pille; Pata, Illar; Mistrík, Martin; De Magalhães, João Pedro; Mazza, Tommaso; Koutná, Irena; Vinciguerra, ManlioStem Cells2022 / p. 35 - 48 https://doi.org/10.1093/stmcls/sxab004 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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53

book article

Hypervariable region in human Na(+)-Ca(2+) exchanger (NCX1) intronic region is associated with cardiovascular traitsKepp, Katrin; Org, Elin; Viigimaa, MargusAnnual Conference of Institute of Molecular and Cell Biology and Estonian Biocentre : 15.12.2009-16.12.20092009 / p. 22-23

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54

journal article EST / journal article ENG

Identification and analysis of mtDNA genomes attributed to Finns reveal long-stagnant demographic trends obscured in the total diversityÖversti, Sanni; Onkamo, Päivi; Stoljarova, Monika; Budowle, Bruce; Sajantila, Antti; Palo, Jukka U.Scientific reports2017 / art. 6193, 10 p. : ill https://doi.org/10.1038/s41598-017-05673-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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55

journal article

Identification of the genome-linked protein in virions of Potato virus A, with comparison to other members in genus PotyvirusOruetxebarria, I.; Guo, D.; Merits, Andres; Mäkinen, K.; Saarma, Mart; Valkonen, J.P.Virus research2001 / p. 103-112 https://www.sciencedirect.com/science/article/abs/pii/S0168170200002161

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56

journal article

Improved chromosome level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) based on SMRT Sequencing and linkage mapBlande, Daniel; Smolander, Olli-Pekka; Ahola, VirpibioRxiv2020 / 32 p https://doi.org/10.1101/2020.11.03.364950

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57

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Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage mapSmolander, Olli-Pekka; Blande, Daniel; Ahola, Virpi; Rastas, Pasi; Tanskanen, Jaakko; Kammonen, Juhana I.; Oostra, Vicencio; Pellegrini, Lorenzo; Ikonen, Suvi; Dallas, TadGigaScience2022 / art. giab097 https://doi.org/10.1093/gigascience/giab097 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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58

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Improving abiotic stress tolerance of forage grasses - prospects of using genome editingSustek-Sanchez, Ferenz; Rognli, Odd Arne; Rostoks, Nils; Sõmera, Merike; Jaškune, Kristina; Kovi, Mallikarjuna Rao; Statkevičiute, Gražina; Sarmiento Guerin, Maria CeciliaFrontiers in plant science2023 / art. 1127532 https://doi.org/10.3389/fpls.2023.1127532 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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59

journal article

In vitro recombinants of two nearly identical potyviral isolates express novel virulence and symptom phenotypes in plantsPaalme, Viiu; Gammelgard, E.; Järvekülg, Lilian; Valkonen, J.P.Journal of general virology2004 / 3, p. 739-747 https://pubmed.ncbi.nlm.nih.gov/14993660/

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60

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Inferring structural variant cancer cell fractionCmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 730 https://doi.org/10.1038/s41467-020-14351-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Aricle at WOS

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61

book article

In-silico identification and characterization of wheat 4AL - Triticum militinae IntrogressionAbrouk, Michael; Jakobson, Irena; Järve, KadriXXII International Plant & Animal Genome Conference : January 10-14, 2014, San Diego, CA, USA : [abstracts]2014 / p. P214

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62

newspaper article

Kommentaar raportile „Genome Editing for Crop Improvement“ (Genoomi täppismuutmine põllukultuuri parendamiseks). ALLEA Symposium Report. October 2020Sarmiento Guerin, Maria CeciliaEesti Teaduste Akadeemia veebileht2020 / 1 lk https://www.akadeemia.ee/wp-content/uploads/2020/12/kommentaar-final.pdf

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63

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The landscape of viral associations in human cancersZapatka, Marc; Borozan, Ivan; Brewer, Daniel S.; Iskar, Murat; Grundhoff, Adam; Alawi, Malik; Desai, Nikita; Sültmann, Holger; Moch, Holger; Cooper, Colin S.; Uusküla-Reimand, LiisNature Genetics2020 / p. 320 - 330 https://doi.org/10.1038/s41588-019-0558-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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64

book article

Lühikese DNA kordusjärjestuste analüüs eestlaste populatsioonis PowerPlexTM 16 abilLagemaa, Kadri; Aaspõllu, Anu; Kelve, MerikeXXVIII Eesti keemiapäevad : teaduskonverentsi ettekannete teesid = 28th Estonian Chemistry Days : abstracts of scientific conference2002 / lk. 74-75

book article

65

dissertation

Massively parallel sequencing of human mitochondrial genome for forensic analysis = Inimese mitokondriaalse genoomi massiivselt paralleelne sekveneerimine forensiliseks analüüsiksStoljarova, Monika2020 https://digikogu.taltech.ee/et/Item/980af58a-f034-43a6-83da-c404205bbd91

dissertation

66

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A meta-analysis of gene expression signatures of blood pressure and hypertensionHuan, Tianxiao; Esko, Tõnu; Peters, Marjolein J.; Pilling, Luke C.; Schramm, Katharina; Schurmann, Claudia; Chen, Brian H.; Liu, Chunyu; Joehanes, Roby; Johnson, Andrew D.; Viigimaa, MargusPLoS Genetics2015 / art. e1005035 https://doi.org/10.1371/journal.pgen.1005035 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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67

book article

MikroRNA-d, nende geenid ja mõju geenide koguarvule genoomidesTruve, ErkkiPärandumise printsiip2006 / lk. 37-38

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68

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Modulation of genetic associations with serum urate levels by body-mass-index in humansHuffman, Jennifer E.; Albrecht, Eva; Teumer, Alexander; Mangino, Massimo; Kapur, Karen; Johnson, Toby; Kutalik, Zoltán; Pirastu, Nicola; Pistis, Giorgio; Lopez, Lorna M.; Haller, Toomas; Salo, Perttu; Viigimaa, MargusPLoS ONE2015 / art. e0119752 https://doi.org/10.1371/journal.pone.0119752 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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69

newspaper article

Nõiatants genoomide "häkkimise" ümberLaas, PeeterStudioosus2012 / lk. 20-21 https://www.ester.ee/record=b1558644*est

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70

journal article EST / journal article ENG

Overview on sobemoviruses and a proposal for the creation of the family sobemoviridaeSõmera, Merike; Sarmiento Guerin, Maria Cecilia; Truve, ErkkiViruses2015 / p. 3076-3115 : ill https://doi.org/10.3390/v7062761 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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71

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Parsing apart the contributors of mitochondrial DNA mixtures with massively parallel sequencing dataChurchill, Jennifer D.; Stoljarova, Monika; King, Jonathan L.; Budowle, BruceForensic science international: genetics supplement series2017 / p. e439-e441 https://doi.org/10.1016/j.fsigss.2017.09.145 Journal metrics at Scopus Article at Scopus

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72

book article

Polyprotein processing of Cocksfoot mottle sobemovirusUffert, Gabriela; Sõmera, Merike; Sõber, Kärt; Kivisaar, Kätlin; Nummert, Grete; Valmsen, Karin; Truve, ErkkiInternational Union of Microbiological Societies Congresses : July 27 - August 1, 2014 : IUMS 2014 : abstracts2014 / p. 211

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73

dissertation

Properties of VPg and coat protein of sobemoviruses = Sobemoviiruste VPg ja kattevalgu omadusedOlspert, Allan2011 https://www.ester.ee/record=b2733154*est

dissertation

74

journal article EST / journal article ENG

Publisher Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)Yuan, Yuan; Ju, Young Seok; Kim, Youngwook; Li, Jun; Wang, Yumeng; Yoon, Christopher J.; Yang, Yang; Martincorena, Inigo; Uusküla-Reimand, LiisNature Genetics2023 / p. 893 https://doi.org/10.1038/s41588-020-0587-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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75

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Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSigRubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 731 https://doi.org/10.1038/s41467-020-14352-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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