Searching - TalTech Research Portal

display

sort

1

journal article EST / journal article ENG

Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns (Nature Communications, (2020), 11, 1, (728), 10.1038/s41467-019-13825-8)Jiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2022 / Art. 7573 https://doi.org/10.1038/s41467-022-32329-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

2

journal article EST / journal article ENG

Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower (Nature Communications, (2020), 11, 1, (734), 10.1038/s41467-019-13929-1)Shuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2022 / art. 7571 https://doi.org/10.1038/s41467-022-32343-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

3

journal article EST / journal article ENG

Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours (Nature Communications, (2020), 11, 1, (737), 10.1038/s41467-019-14052-x)Bhandari, Vinayak; Li, Constance H.; Bristow, Robert G,; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7569 https://doi.org/10.1038/s41467-022-32339-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

4

journal article EST / journal article ENG

Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer (Nature Communications, (2020), 11, 1, (733), 10.1038/s41467-019-13824-9)Sieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7574 https://doi.org/10.1038/s41467-022-32328-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

5

journal article EST / journal article ENG

Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)Zhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7572 https://doi.org/10.1038/s41467-022-32333-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

6

journal article EST / journal article ENG

Author Correction: Inferring structural variant cancer cell fraction (Nature Communications, (2020), 11, 1, (730), 10.1038/s41467-020-14351-8)Cmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2022 / Art. n.r 7568 https://doi.org/10.1038/s41467-022-32338-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

7

journal article EST / journal article ENG

Author Correction: Integrative pathway enrichment analysis of multivariate omics data (Nature Communications, (2020), 11, 1, (735), 10.1038/s41467-019-13983-9)Paczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2022 / art. 7570 https://doi.org/10.1038/s41467-022-32342-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

8

journal article EST / journal article ENG

Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)Reyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7566 https://doi.org/10.1038/s41467-022-32334-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

9

journal article EST / journal article ENG

Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig (Nature Communications, (2020), 11, 1, (731), 10.1038/s41467-020-14352-7)Rubanova, Yulia; Shi, Ruian; Harrigan, Caitlin F.; Li, Roujia; Wintersinger, Jeff; Sahin, Nil; Deshwar, Amit G.; Dentro, Stefan C.; Leshchiner, Ignaty; Uusküla-Reimand, LiisNature Communications2022 / Art. nr. 7567 https://doi.org/10.1038/s41467-022-32336-7 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

10

journal article EST / journal article ENG

Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)Bailey, Matthew H.; Meyerson, William U.; Dursi, Lewis Jonathan; Wang, Liang-Bo; Dong, Guanlan; Liang, Wen-Wei; Weerasinghe, Amila; Li, Shantao; Li, Yize; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 6232 https://doi.org/10.1038/s41467-020-20128-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

11

journal article EST / journal article ENG

Combined burden and functional impact tests for cancer driver discovery using DriverPowerShuai, Shimin; Abascal, Federico; Amin, Samirkumar B.; Bader, Gary D.; Bandopadhayay, Pratiti; Barenboim, Jonathan; Beroukhim, Rameen; Bertl, Johanna; Boroevich, Keith A.; Uusküla-Reimand, LiisNature Communications2020 / art. 734 https://doi.org/10.1038/s41467-019-13929-1 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

12

journal article EST / journal article ENG

A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patternsJiao, Wei; Atwal, Gurnit; Polak, Paz; Karlic, Rosa; Cuppen, Edwin; Al-Shahrour, Fatima; Bailey, Peter J.; Biankin, Andrew V.; Boutros, Paul C.; Uusküla-Reimand, LiisNature Communications2020 / art. 728, 12 p. : ill https://doi.org/10.1038/s41467-019-13825-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

13

journal article EST / journal article ENG

Divergent mutational processes distinguish hypoxic and normoxic tumoursBhandari, Vinayak; Li, Constance H.; Bristow, Robert G.; Boutros, Paul C.; Aaltonen, Lauri A.; Abascal, Federico; Abeshouse, Adam; Aburatani, Hiroyuki; Adams, David J.; Uusküla-Reimand, LiisNature Communications2020 / art. 737, 10 p. : ill https://doi.org/10.1038/s41467-019-14052-x Article at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

14

journal article EST / journal article ENG

Erratum to: Long-haul optical transmission link using low-noise phase-sensitive amplifiers (Nature Communications, (2018), 9, 1, (2513), 10.1038/s41467-018-04956-5)Olsson, Samuel L. I.; Eliasson, Henrik; Astra, Egon; Karlsson, Magnus; Andrekson, Peter A.Nature Communications2018 / Art. nr. 3064 https://doi.org/10.1038/s41467-018-05591-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS

journal article EST / journal article ENG

15

journal article EST / journal article ENG

Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney functionPattaro, Cristian; Teumer, Alexander; Gorski, Mathias; Chu, Audrey Y.; Li, Man; Mijatovic, Vladan; Garnaas, Maija; Tin, Adrienne; Sorice, Rossella; Li, Yong; Viigimaa, MargusNature Communications2016 / art. 10023 https://doi.org/10.1038/ncomms10023 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

16

journal article EST / journal article ENG

Genomic footprints of activated telomere maintenance mechanisms in cancerSieverling, Lina; Hong, Chen; Koser, Sandra D.; Ginsbach, Philip; Kleinheinz, Kortine; Hutter, Barbara; Braun, Delia M.; Cortés-Ciriano, Isidro; Xi, Ruibin; Uusküla-Reimand, LiisNature Communications2020 / art. 733, 13 p. ill https://doi.org/10.1038/s41467-019-13824-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

17

journal article EST / journal article ENG

Globally invariant metabolism but density-diversity mismatch in springtailsPotapov, Anton M.; Guerra, Carlos A.; van den Hoogen, Johan; Babenko, Anatoly; Bellini, Bruno C.; Berg, Matty P.; Chown, Steven L.; Deharveng, Louis; Ivask, Mari; Kuu, AnnelyNature communications2023 / art. 674, 13 p. : ill., map https://doi.org/10.1038/s41467-023-36216-6 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

18

journal article EST / journal article ENG

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterationsZhang, Yiqun; Chen, Fengju; Fonseca, Nuno A.; He, Yao; Fujita, Masashi; Nakagawa, Hidewaki; Zhang, Zemin; Brazma, Alvis; Amin, Samirkumar B.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 736 https://doi.org/10.1038/s41467-019-13885-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

19

journal article

High-sensitive nascent transcript sequencing reveals BRD4-specific control of widespread enhancer and target gene transcriptionBressin, A.; Jasnovidova, Olga; Arnold, M.; Altendorfer, E.; Trajkovski, F.; Kratz, T. A.; Handzlik, J. E.; Hnisz, D.Nature communications2023 / art. 4971 https://doi.org/10.1038/s41467-023-40633-y

journal article

20

journal article EST / journal article ENG

Inferring structural variant cancer cell fractionCmero, Marek; Yuan, Ke; Ong, Cheng Soon; Schröder, Jan; Adams, David J.; Anur, Pavana; Beroukhim, Rameen; Boutros, Paul C.; Bowtell, David D. L.; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 730 https://doi.org/10.1038/s41467-020-14351-8 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Aricle at WOS

journal article EST / journal article ENG

21

journal article EST / journal article ENG

Integrative pathway enrichment analysis of multivariate omics dataPaczkowska, Marta; Barenboim, Jonathan; Sintupisut, Nardnisa; Fox, Natalie S.; Zhu, Helen; Abd-Rabbo, Diala; Mee, Miles W.; Boutros, Paul C.; Abascal, Federico; Uusküla-Reimand, LiisNature Communications2020 / Art. nr. 735 https://doi.org/10.1038/s41467-019-13983-9 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

22

journal article EST / journal article ENG

Long-haul optical transmission link using low-noise phase-sensitive ampliﬁersOlsson, Samuel L. I.; Eliasson, Henrik; Astra, Egon; Karlsson, Magnus; Andrekson, Peter AvoNature communications2018 / art. 2513, 7 p. : ill https://doi.org/10.1038/s41467-018-04956-5 Eesti 27 aastat internetis välismaailmaga: teadlaste uus andmeedastustehnoloogia Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

23

journal article EST / journal article ENG

The non-catalytic role of DNA polymerase epsilon in replication initiation in human cellsVipat, Sameera; Gupta, Dipika; Jonchhe, Sagun; Anderspuk, Hele; Rothenberg, Eli; Moiseeva, TatianaNature communications2022 / art. 7099 https://doi.org/10.1038/s41467-022-34911-4 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

24

journal article EST / journal article ENG

Nonlinear machine learning pattern recognition and bacteria-metabolite multilayer network analysis of perturbed gastric microbiomeDuran, Claudio; Ciucci, Sara; Palladini, Alessandra; Ijaz, Umer Z.; Zippo, Antonio G.; Sterbini, Francesco Paroni; Masucci, Luca; Cammarota, Giovanni; Ianiro, Gianluca; Spuul, Pirjo; Schroeder, MichaelNature communications2021 / art. 1926, 22 p https://doi.org/10.1038/s41467-021-22135-x Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

25

journal article EST / journal article ENG

Pathway and network analysis of more than 2500 whole cancer genomesReyna, Matthew A.; Haan, David; Paczkowska, Marta; Verbeke, Lieven P. C.; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Uusküla-Reimand, LiisNature Communications2020 / art. 729 https://doi.org/10.1038/s41467-020-14367-0 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

Nature communications (source)

types of item

keyword 24