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1
journal article EST
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journal article ENG
Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns (Nature Communications, (2020), 11, 1, (728), 10.1038/s41467-019-13825-8)
Jiao, Wei
;
Atwal, Gurnit
;
Polak, Paz
;
Karlic, Rosa
;
Cuppen, Edwin
;
Al-Shahrour, Fatima
;
Bailey, Peter J.
;
Biankin, Andrew V.
;
Boutros, Paul C.
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. 7573
https://doi.org/10.1038/s41467-022-32329-6
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journal article ENG
2
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journal article ENG
Author correction: A global database for metacommunity ecology, integrating species, traits, environment and space (Scientific Data, (2020), 7, 1, (6), 10.1038/s41597-019-0344-7)
Jeliazkov, Alienor
;
Mijatovic, Darko
;
Chantepie, Stéphane
;
Andrew, Nigel
;
Arlettaz, Raphaël
;
Barbaro, Luc
;
Barsoum, Nadia
;
Bartonova, Alena
;
Reitalu, Triin
Scientific Data
2020
/
Art. 79
https://doi.org/10.1038/s41597-020-0420-z
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journal article EST
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journal article ENG
3
journal article EST
/
journal article ENG
Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower (Nature Communications, (2020), 11, 1, (734), 10.1038/s41467-019-13929-1)
Shuai, Shimin
;
Abascal, Federico
;
Amin, Samirkumar B.
;
Bader, Gary D.
;
Bandopadhayay, Pratiti
;
Barenboim, Jonathan
;
Beroukhim, Rameen
;
Bertl, Johanna
;
Boroevich, Keith A.
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
art. 7571
https://doi.org/10.1038/s41467-022-32343-8
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journal article ENG
4
journal article EST
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journal article ENG
Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours (Nature Communications, (2020), 11, 1, (737), 10.1038/s41467-019-14052-x)
Bhandari, Vinayak
;
Li, Constance H.
;
Bristow, Robert G,
;
Boutros, Paul C.
;
Aaltonen, Lauri A.
;
Abascal, Federico
;
Abeshouse, Adam
;
Aburatani, Hiroyuki
;
Adams, David J.
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. nr. 7569
https://doi.org/10.1038/s41467-022-32339-4
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journal article EST
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journal article ENG
5
journal article EST
/
journal article ENG
Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer (Nature Communications, (2020), 11, 1, (733), 10.1038/s41467-019-13824-9)
Sieverling, Lina
;
Hong, Chen
;
Koser, Sandra D.
;
Ginsbach, Philip
;
Kleinheinz, Kortine
;
Hutter, Barbara
;
Braun, Delia M.
;
Cortés-Ciriano, Isidro
;
Xi, Ruibin
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. nr. 7574
https://doi.org/10.1038/s41467-022-32328-7
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journal article ENG
6
journal article EST
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journal article ENG
Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)
Zhang, Yiqun
;
Chen, Fengju
;
Fonseca, Nuno A.
;
He, Yao
;
Fujita, Masashi
;
Nakagawa, Hidewaki
;
Zhang, Zemin
;
Brazma, Alvis
;
Amin, Samirkumar B.
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. nr. 7572
https://doi.org/10.1038/s41467-022-32333-w
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journal article EST
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journal article ENG
7
journal article EST
/
journal article ENG
Author Correction: Inferring structural variant cancer cell fraction (Nature Communications, (2020), 11, 1, (730), 10.1038/s41467-020-14351-8)
Cmero, Marek
;
Yuan, Ke
;
Ong, Cheng Soon
;
Schröder, Jan
;
Adams, David J.
;
Anur, Pavana
;
Beroukhim, Rameen
;
Boutros, Paul C.
;
Bowtell, David D. L.
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. n.r 7568
https://doi.org/10.1038/s41467-022-32338-5
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journal article EST
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journal article ENG
8
journal article EST
/
journal article ENG
Author Correction: Integrative pathway enrichment analysis of multivariate omics data (Nature Communications, (2020), 11, 1, (735), 10.1038/s41467-019-13983-9)
Paczkowska, Marta
;
Barenboim, Jonathan
;
Sintupisut, Nardnisa
;
Fox, Natalie S.
;
Zhu, Helen
;
Abd-Rabbo, Diala
;
Mee, Miles W.
;
Boutros, Paul C.
;
Abascal, Federico
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
art. 7570
https://doi.org/10.1038/s41467-022-32342-9
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journal article EST
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journal article ENG
9
journal article EST
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journal article ENG
Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)
Reyna, Matthew A.
;
Haan, David
;
Paczkowska, Marta
;
Verbeke, Lieven P. C.
;
Vazquez, Miguel
;
Kahraman, Abdullah
;
Pulido-Tamayo, Sergio
;
Barenboim, Jonathan
;
Wadi, Lina
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. nr. 7566
https://doi.org/10.1038/s41467-022-32334-9
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journal article EST
/
journal article ENG
10
journal article EST
/
journal article ENG
Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig (Nature Communications, (2020), 11, 1, (731), 10.1038/s41467-020-14352-7)
Rubanova, Yulia
;
Shi, Ruian
;
Harrigan, Caitlin F.
;
Li, Roujia
;
Wintersinger, Jeff
;
Sahin, Nil
;
Deshwar, Amit G.
;
Dentro, Stefan C.
;
Leshchiner, Ignaty
;
Uusküla-Reimand, Liis
Nature Communications
2022
/
Art. nr. 7567
https://doi.org/10.1038/s41467-022-32336-7
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journal article EST
/
journal article ENG
11
journal article EST
/
journal article ENG
Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)
Bailey, Matthew H.
;
Meyerson, William U.
;
Dursi, Lewis Jonathan
;
Wang, Liang-Bo
;
Dong, Guanlan
;
Liang, Wen-Wei
;
Weerasinghe, Amila
;
Li, Shantao
;
Li, Yize
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 6232
https://doi.org/10.1038/s41467-020-20128-w
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journal article EST
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journal article ENG
12
journal article EST
/
journal article ENG
Author Correction: SciPy 1.0 : fundamental algorithms for scientific computing in Python (Nature Methods, (2020), 17, 3, (261-272), 10.1038/s41592-019-0686-2)
Virtanen, Pauli
;
Gommers, Ralf
;
Oliphant, Travis E.
;
Haberland, Matt
;
Reddy, Tyler
;
Cournapeau, David
;
Burovski, Evgeni
;
Peterson, Pearu
;
Weckesser, Warren
;
Bright, Jonathan
Nature Methods
2020
/
p. 352
https://doi.org/10.1038/s41592-020-0772-5
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journal article EST
/
journal article ENG
Seotud publikatsioonid
1
SciPy 1.0 : fundamental algorithms for scientific computing in Python
13
journal article EST
/
journal article ENG
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis
Carlevaro-Fita, Joan
;
Lanzós, Andrés
;
Feuerbach, Lars
;
Hong, Chen
;
Mas-Ponte, David
;
Pedersen, Jakob Skou
;
Abascal, Federico
;
Amin, Samirkumar B.
;
Johnson, Rory
;
Uusküla-Reimand, Liis
Communications Biology
2020
/
Art. nr. 56
https://doi.org/10.1038/s42003-019-0741-7
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journal article EST
/
journal article ENG
14
journal article EST
/
journal article ENG
Combined burden and functional impact tests for cancer driver discovery using DriverPower
Shuai, Shimin
;
Abascal, Federico
;
Amin, Samirkumar B.
;
Bader, Gary D.
;
Bandopadhayay, Pratiti
;
Barenboim, Jonathan
;
Beroukhim, Rameen
;
Bertl, Johanna
;
Boroevich, Keith A.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
art. 734
https://doi.org/10.1038/s41467-019-13929-1
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journal article EST
/
journal article ENG
15
journal article EST
/
journal article ENG
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing
Cortés-Ciriano, Isidro
;
Lee, Jake June-Koo
;
Xi, Ruibin
;
Jain, Dhawal
;
Jung, Youngsook Lucy
;
Yang, Lixing
;
Gordenin, Dmitry
;
Klimczak, Leszek J.
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 331-341
https://doi.org/10.1038/s41588-019-0576-7
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journal article EST
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journal article ENG
16
journal article EST
/
journal article ENG
Comprehensive molecular characterization of mitochondrial genomes in human cancers
Yuan, Yuan
;
Ju, Young Seok
;
Kim, Youngwook
;
Li, Jun
;
Wang, Yumeng
;
Yoon, Christopher J.
;
Yang, Yang
;
Martincorena, Inigo
;
Creighton, Chad J.
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 342 - 352
https://doi.org/10.1038/s41588-019-0557-x
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journal article ENG
17
journal article EST
/
journal article ENG
Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer
Akdemir, Kadir Caner
;
Le, Victoria T.
;
Chandran, Sahaana
;
Li, Yilong
;
Verhaak, Roel G.W.
;
Beroukhim, Rameen
;
Campbell, Peter J.
;
Chin, Lynda
;
Dixon, Jesse R.
;
Futreal, Phillip Andrew
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 294 - 305
https://doi.org/10.1038/s41588-019-0564-y
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journal article ENG
18
journal article EST
/
journal article ENG
High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations
Zhang, Yiqun
;
Chen, Fengju
;
Fonseca, Nuno A.
;
He, Yao
;
Fujita, Masashi
;
Nakagawa, Hidewaki
;
Zhang, Zemin
;
Brazma, Alvis
;
Amin, Samirkumar B.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 736
https://doi.org/10.1038/s41467-019-13885-w
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journal article ENG
19
journal article
High-sensitive nascent transcript sequencing reveals BRD4-specific control of widespread enhancer and target gene transcription
Bressin, A.
;
Jasnovidova, Olga
;
Arnold, M.
;
Altendorfer, E.
;
Trajkovski, F.
;
Kratz, T. A.
;
Handzlik, J. E.
;
Hnisz, D.
Nature communications
2023
/
art. 4971
https://doi.org/10.1038/s41467-023-40633-y
journal article
20
journal article EST
/
journal article ENG
Inferring structural variant cancer cell fraction
Cmero, Marek
;
Yuan, Ke
;
Ong, Cheng Soon
;
Schröder, Jan
;
Adams, David J.
;
Anur, Pavana
;
Beroukhim, Rameen
;
Boutros, Paul C.
;
Bowtell, David D. L.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 730
https://doi.org/10.1038/s41467-020-14351-8
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journal article EST
/
journal article ENG
21
journal article EST
/
journal article ENG
Integrative pathway enrichment analysis of multivariate omics data
Paczkowska, Marta
;
Barenboim, Jonathan
;
Sintupisut, Nardnisa
;
Fox, Natalie S.
;
Zhu, Helen
;
Abd-Rabbo, Diala
;
Mee, Miles W.
;
Boutros, Paul C.
;
Abascal, Federico
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 735
https://doi.org/10.1038/s41467-019-13983-9
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journal article EST
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journal article ENG
22
journal article EST
/
journal article ENG
The landscape of viral associations in human cancers
Zapatka, Marc
;
Borozan, Ivan
;
Brewer, Daniel S.
;
Iskar, Murat
;
Grundhoff, Adam
;
Alawi, Malik
;
Desai, Nikita
;
Sültmann, Holger
;
Moch, Holger
;
Cooper, Colin S.
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 320 - 330
https://doi.org/10.1038/s41588-019-0558-9
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journal article EST
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journal article ENG
23
journal article EST
/
journal article ENG
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Rubanova, Yulia
;
Shi, Ruian
;
Harrigan, Caitlin F.
;
Li, Roujia
;
Wintersinger, Jeff
;
Sahin, Nil
;
Deshwar, Amit G.
;
Dentro, Stefan C.
;
Leshchiner, Ignaty
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 731
https://doi.org/10.1038/s41467-020-14352-7
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journal article EST
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journal article ENG
24
journal article EST
/
journal article ENG
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples
Bailey, Matthew H.
;
Meyerson, William U.
;
Dursi, Lewis Jonathan
;
Wang, Liang-Bo
;
Dong, Guanlan
;
Liang, Wen-Wei
;
Weerasinghe, Amila
;
Li, Shantao
;
Kelso, Sean
;
Vijay Raghavan, Krishnaswamy
Nature Communications
2020
/
Art. nr. 4748
https://doi.org/10.1038/s41467-020-18151-y
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journal article ENG
25
journal article EST
/
journal article ENG
Sex differences in oncogenic mutational processes
Li, Constance H.
;
Prokopec, Stephenie D.
;
Sun, Ren X.
;
Yousif, Fouad
;
Schmitz, Nathaniel
;
Al-Shahrour, Fatima
;
Atwal, Gurnit
;
Bailey, Peter J.
;
Biankin, Andrew V.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 4330
https://doi.org/10.1038/s41467-020-17359-2
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Number of records 25, displaying
1 - 25
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86
1.
Changing nature of work
2.
nature
3.
nature inspired
4.
nature protection
5.
nature tourism
6.
nature values
7.
nature writing
8.
nature-inspired tribology
9.
nature-like fishway
10.
values of nature
11.
Action design research
12.
action research
13.
agriculture applied research
14.
biomedical research
15.
business model research
16.
commercialization of publicly funded research
17.
Community-based research
18.
contemporary research
19.
design science research
20.
desk research
21.
economy of research
22.
emerging research
23.
entrepreneurship research
24.
ergonomic research
25.
EU Horizon 2020 research project GRACE (Integrated oil spill response actions and environmental effects)
26.
European Code of Conduct for Research Integrity
27.
European research area
28.
Fish Research
29.
future research
30.
Information Systems research
31.
international research
32.
key research index
33.
longitudinal research
34.
mixed method research
35.
new research direction
36.
operations research
37.
ownership research
38.
park research
39.
participatory action research
40.
public research funding
41.
public research groups
42.
public sector accounting research
43.
qualitative research
44.
qualitative research methods
45.
R&D (research and development)
46.
research
47.
research and development
48.
research and development (R&D)
49.
research and development jobs
50.
research and industrial policy
51.
research and training scenarios
52.
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53.
research avenues
54.
research challenges
55.
research design
56.
research funding
57.
research gaps
58.
research integration
59.
research libraries
60.
research methodologies
61.
research methodology
62.
research methodology and method
63.
research methods
64.
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65.
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66.
research oriented teaching
67.
research phiosophies
68.
research priority
69.
research relevance
70.
research strategies
71.
research traditions
72.
research trends
73.
research universities
74.
research with scale-up
75.
research-based education
76.
research-funding system
77.
research-oriented learning
78.
research-practice gap
79.
retaining research financing, changes in salary rules; new academic career model
80.
retinal pathology/research
81.
state of the art research
82.
survey research
83.
The Joint Research Centre (JRC)
84.
training and research tool
85.
urban design research
86.
urban research and innovation
subject term
3
1.
European Consortium for Political Research (ECPR)
2.
Nordic Energy Research
3.
Research and Education in Mechatronics (REM 2008)
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