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Uusküla-Reimand, Liis (TTÜ author)
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26
journal article EST
/
journal article ENG
Candidate cancer driver mutations in distal regulatory elements and long-range chromatin interaction networks
Zhu, Helen
;
Uusküla-Reimand, Liis
;
Isaev, Keren
;
Wadi, Lina
;
Alizada, Azad
;
Shuai, Shimin
;
Huang, Vincent
;
Aduluso-Nwaobasi, Dike
;
Paczkowska, Marta
;
Abd-Rabbo, Diala
;
Ocsenas, Oliver
;
Liang, Minggao
;
Thompson, J. Drew
;
Li, Yao
;
Ruan, Luyao
;
Krassowski, Michal
;
Dzneladze, Irakli
;
Simpson, Jared T.
;
Lupien, Mathieu
;
Stein, Lincoln D.
;
Boutros, Paul C.
;
Wilson, Michael D.
;
Reimand, Jüri
Molecular Cell
2020
/
p. 1307-1321.e10
https://doi.org/10.1016/j.molcel.2019.12.027
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journal article ENG
27
journal article EST
/
journal article ENG
Combined burden and functional impact tests for cancer driver discovery using DriverPower
Shuai, Shimin
;
Abascal, Federico
;
Amin, Samirkumar B.
;
Bader, Gary D.
;
Bandopadhayay, Pratiti
;
Barenboim, Jonathan
;
Beroukhim, Rameen
;
Bertl, Johanna
;
Boroevich, Keith A.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
art. 734
https://doi.org/10.1038/s41467-019-13929-1
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28
journal article EST
/
journal article ENG
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing
Cortés-Ciriano, Isidro
;
Lee, Jake June-Koo
;
Xi, Ruibin
;
Jain, Dhawal
;
Jung, Youngsook Lucy
;
Yang, Lixing
;
Gordenin, Dmitry
;
Klimczak, Leszek J.
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 331-341
https://doi.org/10.1038/s41588-019-0576-7
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29
journal article EST
/
journal article ENG
Comprehensive molecular characterization of mitochondrial genomes in human cancers
Yuan, Yuan
;
Ju, Young Seok
;
Kim, Youngwook
;
Li, Jun
;
Wang, Yumeng
;
Yoon, Christopher J.
;
Yang, Yang
;
Martincorena, Inigo
;
Creighton, Chad J.
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 342 - 352
https://doi.org/10.1038/s41588-019-0557-x
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journal article ENG
30
journal article EST
/
journal article ENG
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
Jiao, Wei
;
Atwal, Gurnit
;
Polak, Paz
;
Karlic, Rosa
;
Cuppen, Edwin
;
Al-Shahrour, Fatima
;
Bailey, Peter J.
;
Biankin, Andrew V.
;
Boutros, Paul C.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
art. 728, 12 p. : ill
https://doi.org/10.1038/s41467-019-13825-8
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31
journal article EST
/
journal article ENG
Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer
Akdemir, Kadir Caner
;
Le, Victoria T.
;
Chandran, Sahaana
;
Li, Yilong
;
Verhaak, Roel G.W.
;
Beroukhim, Rameen
;
Campbell, Peter J.
;
Chin, Lynda
;
Dixon, Jesse R.
;
Futreal, Phillip Andrew
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 294 - 305
https://doi.org/10.1038/s41588-019-0564-y
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journal article ENG
32
journal article EST
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journal article ENG
Gene expression profiling of puberty-associated genes reveals abundant tissue and sex-specific changes across postnatal development
Hou, Huayun
;
Uusküla-Reimand, Liis
;
Makarem, Maisam
;
Corre, Christina
;
Saleh, Shems
;
Metcalf, Ariane
;
Goldenberg, Anna
;
Palmert, Mark R.
;
Wilson, Michael D.
Human molecular genetics
2017
/
p. 3585-3599 : ill
https://doi.org/10.1093/hmg/ddx246
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journal article EST
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journal article ENG
33
journal article EST
/
journal article ENG
Genomic footprints of activated telomere maintenance mechanisms in cancer
Sieverling, Lina
;
Hong, Chen
;
Koser, Sandra D.
;
Ginsbach, Philip
;
Kleinheinz, Kortine
;
Hutter, Barbara
;
Braun, Delia M.
;
Cortés-Ciriano, Isidro
;
Xi, Ruibin
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
art. 733, 13 p. ill
https://doi.org/10.1038/s41467-019-13824-9
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journal article ENG
34
journal article EST
/
journal article ENG
High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations
Zhang, Yiqun
;
Chen, Fengju
;
Fonseca, Nuno A.
;
He, Yao
;
Fujita, Masashi
;
Nakagawa, Hidewaki
;
Zhang, Zemin
;
Brazma, Alvis
;
Amin, Samirkumar B.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 736
https://doi.org/10.1038/s41467-019-13885-w
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journal article ENG
35
journal article EST
/
journal article ENG
Inferring structural variant cancer cell fraction
Cmero, Marek
;
Yuan, Ke
;
Ong, Cheng Soon
;
Schröder, Jan
;
Adams, David J.
;
Anur, Pavana
;
Beroukhim, Rameen
;
Boutros, Paul C.
;
Bowtell, David D. L.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 730
https://doi.org/10.1038/s41467-020-14351-8
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journal article ENG
36
journal article EST
/
journal article ENG
Integrative pathway enrichment analysis of multivariate omics data
Paczkowska, Marta
;
Barenboim, Jonathan
;
Sintupisut, Nardnisa
;
Fox, Natalie S.
;
Zhu, Helen
;
Abd-Rabbo, Diala
;
Mee, Miles W.
;
Boutros, Paul C.
;
Abascal, Federico
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 735
https://doi.org/10.1038/s41467-019-13983-9
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journal article ENG
37
journal article EST
/
journal article ENG
Interactome rewiring following pharmacological targeting of BET bomodomains
Lambert, Jean-Philippe
;
Picaud, Sarah
;
Fujisawa, Takao
;
Uusküla-Reimand, Liis
Molecular cell
2019
/
p. 621-638.e17 : ill
https://doi.org/10.1016/j.molcel.2018.11.006
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journal article EST
/
journal article ENG
38
journal article EST
/
journal article ENG
The landscape of viral associations in human cancers
Zapatka, Marc
;
Borozan, Ivan
;
Brewer, Daniel S.
;
Iskar, Murat
;
Grundhoff, Adam
;
Alawi, Malik
;
Desai, Nikita
;
Sültmann, Holger
;
Moch, Holger
;
Cooper, Colin S.
;
Uusküla-Reimand, Liis
Nature Genetics
2020
/
p. 320 - 330
https://doi.org/10.1038/s41588-019-0558-9
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journal article ENG
39
journal article EST
/
journal article ENG
Pan-cancer analysis of whole genomes
Campbell, Peter J.
;
Getz, Gad
;
Korbel, Jan O.
;
Stuart, Joshua M.
;
Jennings, Jennifer L.
;
Stein, Lincoln D.
;
Perry, Marc D.
;
Nahal-Bose, Hardeep K.
;
Ouellette, B. F. Francis
;
Uusküla-Reimand, Liis
Nature
2020
/
12 p. : ill
https://doi.org/10.1038/s41586-020-1969-6
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journal article EST
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journal article ENG
40
journal article EST
/
journal article ENG
Pathway and network analysis of more than 2500 whole cancer genomes
Reyna, Matthew A.
;
Haan, David
;
Paczkowska, Marta
;
Verbeke, Lieven P. C.
;
Vazquez, Miguel
;
Kahraman, Abdullah
;
Pulido-Tamayo, Sergio
;
Barenboim, Jonathan
;
Wadi, Lina
;
Dhingra, Priyanka
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
art. 729
https://doi.org/10.1038/s41467-020-14367-0
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journal article EST
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journal article ENG
41
journal article EST
/
journal article ENG
Publisher Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)
Yuan, Yuan
;
Ju, Young Seok
;
Kim, Youngwook
;
Li, Jun
;
Wang, Yumeng
;
Yoon, Christopher J.
;
Yang, Yang
;
Martincorena, Inigo
;
Uusküla-Reimand, Liis
Nature Genetics
2023
/
p. 893
https://doi.org/10.1038/s41588-020-0587-4
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journal article EST
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journal article ENG
42
journal article EST
/
journal article ENG
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Rubanova, Yulia
;
Shi, Ruian
;
Harrigan, Caitlin F.
;
Li, Roujia
;
Wintersinger, Jeff
;
Sahin, Nil
;
Deshwar, Amit G.
;
Dentro, Stefan C.
;
Leshchiner, Ignaty
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 731
https://doi.org/10.1038/s41467-020-14352-7
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journal article ENG
43
journal article EST
/
journal article ENG
Sex differences in oncogenic mutational processes
Li, Constance H.
;
Prokopec, Stephenie D.
;
Sun, Ren X.
;
Yousif, Fouad
;
Schmitz, Nathaniel
;
Al-Shahrour, Fatima
;
Atwal, Gurnit
;
Bailey, Peter J.
;
Biankin, Andrew V.
;
Uusküla-Reimand, Liis
Nature Communications
2020
/
Art. nr. 4330
https://doi.org/10.1038/s41467-020-17359-2
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journal article ENG
44
journal article EST
/
journal article ENG
Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders
Uusküla-Reimand, Liis
;
Hou, Huayun
;
Samavarchi-Tehrani, Payman
Genome biology
2016
/
art. 182, p. 1-22 : ill
https://doi.org/10.1186/s13059-016-1043-8
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Number of records 44, displaying
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111
1.
Uusküla-Reimand, Liis
2.
Reimand, Indrek
3.
Reimand, Juhan
4.
Reimand, Jüri
5.
Uusküla, Enn
6.
Uusküla, Lenno
7.
Uusküla, Mari
8.
Aasmann, Liis
9.
Animägi, Mari-Liis
10.
Arujärv, Liis
11.
Arujärv, Maarja-Liis
12.
Auväärt, Liis
13.
Brük, Mari-Liis
14.
Eensalu, Mari-Liis
15.
Ehavere, Liis
16.
Elland, Maarja-Liis
17.
Elmi, Liis
18.
Eskla, Kattri-Liis
19.
Esvald, Ele-Liis
20.
Help, Helle-Liis
21.
Helvik, Mari-Liis
22.
Hääl, Maire-Liis
23.
Hüvato, Mari-Liis
24.
Ilves, Liis
25.
Jaagant, Liis
26.
Kaiva, Lisanne-Liis
27.
Kala, Liis
28.
Kambek, Liis
29.
Kann, Eda-Liis
30.
Kasari‐Toussaint, Liis
31.
Kaselaan, Liis
32.
Kasemets, Mari-Liis
33.
Kauts, Mari-Liis
34.
Keerberg, Liis
35.
Keerberg, Liis,
36.
Kleesment, Anne-Liis
37.
Kolberg, Liis
38.
Konts, Mari-Liis
39.
Korts, Liis
40.
Krass, Christin Liis
41.
Kruus, Liis
42.
Kukk, Mari-Liis
43.
Kuuse, Mari-Liis
44.
Kõks, Kerttu-Liis
45.
Kängsepp, Liis
46.
Kütt, Mary-Liis
47.
Laanetu, Mari-Liis
48.
Laikoja, Liis
49.
Laikoja, Linda-Liis
50.
Leinus, Mari-Liis
51.
Lepik, Katri-Liis
52.
Lepp, Grete-Liis
53.
Lichfeld, Liis
54.
Liis, Moonika
55.
Lilje, Liis
56.
Linn, Liis
57.
Loorits, Liis
58.
Looveer, Triinu-Liis
59.
Ludvig, Mari-Liis
60.
Luige, Liis
61.
Luik, Liis
62.
Lutter, Liis
63.
Luuk, Liis
64.
Miller, Mari Liis
65.
Muulmann, Mari-Liis
66.
Mägi, Mari-Liis
67.
Nolo, Anne-Liis
68.
Ojamäe, Liis
69.
Oper, Liis
70.
Org, Mai-Liis
71.
Pae, Liis Anette
72.
Paenurm, Mai-Liis
73.
Peterson, Anne-Liis
74.
Põder, Mari-Liis
75.
Põldvere, Anne-Liis
76.
Pählapuu, Liis
77.
Remmel, Anna-Liis
78.
Roosvald, Liis
79.
Rull, Liis
80.
Räis, Mari Liis
81.
Rüütel, Maarja-Liis
82.
Saar, Liis
83.
Salupõld, Kadri-Liis
84.
Seinberg, Liis
85.
Seljamaa, Liis
86.
Sepp, Mari-Liis
87.
Sillat, Mari-Liis
88.
Simson, Anne-Liis
89.
Sinijärv, Liis
90.
Sipelgas, Liis
91.
Somelar, Mari-Liis
92.
Suurorg, Mari-Liis
93.
Zovo, Liis
94.
Tabri, Liis
95.
Talpas, Liis
96.
Tamm, Mari-Liis
97.
Tammik, Mari-Liis
98.
Tetsov, Liis
99.
Tombak, Mari-Liis
100.
Tomson, Liis
101.
Toomsalu, Liis
102.
Treimann, Liis
103.
Treimann, Meri Liis
104.
Truusööt, Mari-Liis
105.
Tänav, Anne-Liis
106.
Ummik, Mari-Liis
107.
Uudelepp, Mari-Liis
108.
Vaksmann, Liis
109.
Veinberg, Mai-Liis
110.
Vimm, Kersti-Liis
111.
Vinne, Liis-Erliken
CV
29
1.
Uusküla-Reimand, Liis 1983
2.
Reimand, Juhan 1987
3.
Uusküla, Maire (?)
4.
Brük, Mari-Liis 1995
5.
Elland, Maarja-Liis 1990
6.
Hamburg, Liis 1994
7.
Hääl, Maire-Liis 1938-2019
8.
Kasemets, Mari-Liis 1987
9.
Kleesment, Anne-Liis 1935
10.
Kukk, Mari-Liis
11.
Kukk, Mari-Liis 1990
12.
Kuuse, Mari-Liis
13.
Leinus, Mari-Liis 1995
14.
Lichfeld, Liis 1942
15.
Ludvig, Mari-Liis
16.
Margus, Liis
17.
Muulmann, Mari-Liis
18.
Ojamäe, Liis 1977
19.
Org, Mai-Liis
20.
Saar, Kadi Liis 1992
21.
Simson, Anne-Liis 1943
22.
Sipelgas, Liis 1975
23.
Tamme, Anne-Liis
24.
Tombak, Mari-Liis 1990
25.
Tomson, Liis
26.
Tuur, Liis 1977
27.
Ummik, Mari-Liis 1982
28.
Vesper, Kai-Liis 1997
29.
Viilup, Maire-Liis
name of the person
26
1.
Reimand, Juhan
2.
Elland, Maarja-Liis
3.
Hääl, Maire-Liis, 1938-
4.
Karbus, Liis
5.
Krigul, Kertu Liis
6.
Kukk, Mari-Liis
7.
Kuuse, Mari-Liis
8.
Kütt, Mari-Liis
9.
Muulmann, Mari-Liis
10.
Ojamäe, Liis
11.
Rebane, Liis
12.
Saare, Liis
13.
Sepaste, Mari-Liis
14.
Silberg, Liis Getter
15.
Sipelgas, Liis
16.
Talpas, Liis
17.
Tamm, Mari-Liis
18.
Tammekand, Liis
19.
Tammik, Mari-Liis
20.
Teemusk, Liis
21.
Tiisvelt, Liis
22.
Treimann, Liis
23.
Tänav, Anne-Liis
24.
Vesper, Kai-Liis
25.
Vimm, Kersti-Liis
26.
Vähejaus, Liis
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