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Absolute quantitative multi-omics characterization of specific growth rate-dependent metabolism of Escherichia coli = Absoluutselt kvantitatiivsetel oomikameetoditel põhinev kasvuerikiirusest sõltuva Escherichia coli metabolismi kirjeldamineValgepea, Kaspar2014 https://digi.lib.ttu.ee/i/?1089

dissertation

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journal article EST / journal article ENG

Avoiding amino acid depletion in a complex medium results in improved Escherichia coli BW25113 growthMaser, Andres; Peebo, Karl; Nahku, RannoMicrobiology2019 / p. 37-46 : ill https://doi.org/10.1099/mic.0.000742 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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journal article

Comparison and applications of label-free absolute proteome quantification methods on Escherichia coliArike, Liisa; Valgepea, Kaspar; Peil, Lauri; Nahku, Ranno; Adamberg, Kaarel; Vilu, RaivoJournal of proteomics2012 / p. 5437-5448 : ill https://pubmed.ncbi.nlm.nih.gov/22771841/

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journal article EST / journal article ENG

A conundrum of r-protein stability : unbalanced stoichiometry of r-proteins during stationary phase in Escherichia coliReier, Kaspar; Lahtvee, Petri-Jaan; Liiv, Aivar; Remme, JaanusmBio2022 / art. e01873-22 : ill https://doi.org/10.1128/mbio.01873-22 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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journal article

Coordinated activation of PTA-ACS and TCA cycles strongly reduces overflow metabolism of acetate in Escherichia coliPeebo, Karl; Valgepea, Kaspar; Nahku, Ranno; Riis, Gethe; Õun, Mikk; Adamberg, Kaarel; Vilu, RaivoApplied microbiology and biotechnology2014 / p. 5131-5143 : ill

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journal article

Decrease of energy spilling in Escherichia coli continuous cultures with rising specific growth rate and carbon wastingValgepea, Kaspar; Adamberg, Kaarel; Vilu, RaivoBMC systems biology2011 / p. 106 https://pubmed.ncbi.nlm.nih.gov/21726468/

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journal article

Detection of bioavailable heavy metals in EILATox-Oregon samples using whole-cell luminescent bacterial sensors in suspension or immobilized onto fibre-optic tipsHakkila, K.; Green, T.; Leskinen, P.; Ivask, Angela; Marks, R.; Virta, MarkoJournal of applied toxicology2004 / 5, p. 333-342 https://pubmed.ncbi.nlm.nih.gov/15478176/

journal article

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newspaper article

Ekspert: Kuressaares tuleb ilmselt paar nädalat vett keeta, vanni minna ei soovitamaaleht.delfi.ee2023 Ekspert: Kuressaares tuleb ilmselt paar nädalat vett keeta, vanni minna ei soovita

newspaper article

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journal article

Escherichia coli achieves faster growth by increasing catalytic and translation rates of proteinsValgepea, Kaspar; Adamberg, Kaarel; Seiman, Andrus; Vilu, RaivoMolecular biosystems2013 / p. 2344-2358 : ill

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book article

Escherichia coli achieves faster growth by increasing catalytic and translation rates of proteinsValgepea, Kaspar; Adamberg, Kaarel; Seiman, Andrus; Vilu, RaivoTÜ ja TTÜ doktorikool "Funktsionaalsed materjalid ja tehnoloogiad" : 04.-05. märts 2014, Tartu2014 / [1] p

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journal article

Identification and relative quantification of proteins in Escherichia coli proteome by “up-front” collision-induced dissociationArike, Liisa; Nahku, Ranno; Borissova, Maria; Adamberg, Kaarel; Vilu, RaivoEuropean journal of mass spectrometry2010 / 2, p. 227-235 https://pubmed.ncbi.nlm.nih.gov/20212332/

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journal article

Lean-proteome strains - next step in metabolic engineeringValgepea, Kaspar; Peebo, Karl; Adamberg, Kaarel; Vilu, RaivoFrontiers in bioengineering and biotechnology2015 / p. 1-4 http://dx.doi.org/10.3389/fbioe.2015.00011

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journal article EST / journal article ENG

Levan enhances associated growth of Bacteroides, Escherichia, Streptococcus and Faecalibacterium in fecal microbiotaAdamberg, Kaarel; Tomson, Katrin; Talve, Tiina; Pudova, Ksenia; Puurand, Marju; Visnapuu, Triinu; Alamäe, Tiina; Adamberg, SignePLoS ONE2015 / p. 1-18 : ill https://doi.org/10.1371/journal.pone.0144042 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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book article

Motiliini ekspresseerimisest Escherichia coli'sTomson, Katrin; Vanatalu, K.XXVIII Eesti keemiapäevad : teaduskonverentsi ettekannete teesid = 28th Estonian Chemistry Days : abstracts of scientific conference2002 / lk. 141-142

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journal article EST / journal article ENG

A multifunctional strontium/silver-co-substituted hydroxyapatite derived from biogenic source as antibacterial biomaterialRessler, Antonia; Ivanković, Tomislav; Polak, Bruno; Ivanišević, Irena; Kovačić, Marin; Urlić, Inga; Hussainova, Irina; Ivanković, HrvojeCeramics International2022 / p. 18361 - 18373 https://doi.org/10.1016/j.ceramint.2022.03.095 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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journal article EST / journal article ENG

Photocatalytic antibacterial activity of nano-TiO2 (anatase)-based thin films : effects on Escherichia coli cells and fatty acidsJoost, Urmas; Juganson, Katre; Visnapuu, Meeri; Mortimer, Monika; Kahru, Anne; Nõmmiste, Ergo; Joost, Urmeli; Kisand, Vambola; Ivask, AngelaJournal of photochemistry and photobiology B : biology2015 / p. 178-185 : ill https://doi.org/10.1016/j.jphotobiol.2014.12.010 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

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dissertation

Production of labelled recombinant proteins in fed-batch system in Escherchia coli = Märgistatud rekombinantsete valkude tootmine Escherichia coli fed-batch süsteemidesTomson, Katrin2007 https://www.ester.ee/record=b2324657*est

dissertation

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journal article

Proteome reallocation in Escherichia coli with increasing specific growth ratePeebo, Karl; Valgepea, Kaspar; Maser, Andres; Nahku, Ranno; Adamberg, Kaarel; Vilu, RaivoMolecular biosystems2015 / p. 1184-1193 : ill http://dx.doi.org/10.1039/c4mb00721b

journal article

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dissertation

Quantitative proteomics of Escherichia coli : from relative to absolute scale = Kvantitatiivne Escherichia coli proteoomika : relatiivsetest numbritest absoluutsete kogusteniArike, Liisa2012 http://www.ester.ee/record=b2931221*est

dissertation

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newspaper article

Rannahooaeg läheneb vankumatu kiirusega – Stroomi ranna külastajatele on algavaks suveks üks hea ja üks halb uudis [Võrguväljaanne]Pau, Aivarforte.delfi.ee2021 "Rannahooaeg läheneb vankumatu kiirusega – Stroomi ranna külastajatele on algavaks suveks üks hea ja üks halb uudis"

newspaper article

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journal article

Specific growth rate dependent transcriptiome profiling of Escherichia coli K12 MG1655 in accelerostat culturesNahku, Ranno; Valgepea, Kaspar; Lahtvee, Petri-Jaan; Erm, Sten; Abner, Kristo; Adamberg, Kaarel; Vilu, RaivoJournal of biotechnology2010 / 1, p. 60-65 https://www.sciencedirect.com/science/article/pii/S0168165609004726

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journal article

Stock culture heterogeneity rather than new mutational variation complicates short-term cell physiology studies of Escherichia coli K-12 MG1655 in continuous cultureNahku, Ranno; Peebo, Karl; Valgepea, Kaspar; Barrick, Jeffrey E.; Adamberg, Kaarel; Vilu, RaivoMicrobiology2011 / p. 2604-2610 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3352173/

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journal article

The growth rate control in Escherichia coli at near to maximum growth rates : the A-stat approachPaalme, Toomas; Elken, R.; Kahru, Anne; Vanatalu, Kalju; Vilu, RaivoAntonie van Leeuwenhoek journal of microbiology1997 / p. 217-230: ill

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journal article EST / journal article ENG

The transcription factor network of E. coli steers global responses to shifts in RNAP concentrationAlmeida, Bilena L.B.; Bahrudeen, Mohamed N. M.; Chauhan, Vatsala; Dash, Suchintak; Kandavalli, Vinodh; Häkkinen, Antti; Lloyd-Price, Jason; Cristina, Palma S. D.; Baptista, Ines S. C.; Smolander, Olli-PekkaNucleic acids research2022 / p. 6801-6819 https://doi.org/10.1093/nar/gkac540 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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uCARE Chem Suite and uCAREChemSuiteCLI : tools for bacterial resistome predictionSaha, Saurav Bhaskar; Gupta, Vijai Kumar; Ramteke, Pramod WasudeoGenes and Diseases2021 / p. 721 - 729 https://doi.org/10.1016/j.gendis.2020.06.008 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

journal article EST / journal article ENG

Escherichia coli (subject term)

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