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Microbiome interconnectedness throughout environments with major consequences for healthy people and a healthy planetSessitsch, Angela; Wakelin, Steve; Schloter, Michael; Maguin, Emmanuelle; Cernava, Tomislav; Champomier-Verges, Marie-Christine; Charles, Trevor C.; Cotter, Paul D.; Ferrocino, Ilario; Kriaa, Aicha; Lebre, Pedro; Cowan, Don; Lange, Lene; Kiran, Seghal; Markiewicz, Lidia; Meisner, Annelein; Olivares, Marta; Sarand, Inga; Schelkle, Bettina; Selvin, Joseph; Smidt, Hauke; van Overbeek, Leo; Berg, Gabriele; Cocolin, Luca; Sanz, Yolanda; Fernandes, Wilson Lemos; Liu, S. J.; Ryan, Matthew; Singh, Brajesh; Kostic, TanjaMicrobiology and molecular biology reviews2023 https://doi.org/10.1128/mmbr.00212-22 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Molecular mechanism of mitoquinol mesylate in mitigating the progression of hepatocellular carcinoma - in silico and in vivo studiesSulaimon, Lateef Adegboyega; Adisa, Rahmat Adetutu; Samuel, Titilola Aderonke; Joel, Ireoluwa Yinka; Ayankojo, Akinrinade George; Abdulkareem, Fatimah Biade; Olaniyi, Timothy OlajireJournal of Cellular Biochemistry2021 / p. 1157-1172 https://doi.org/10.1002/jcb.29937 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcodingSildever, Sirje; Nishi, Noriko; Inaba, Nobuharu; Asakura, Taiga; Kikuchi, Jun; Asano, Yasuhito; Kobayashi, Takanori; Gojobori, Takashi; Nagai, SatoshiMetabarcoding and metagenomics2022 / art. e79471 https://doi.org/10.3897/mbmg.6.79471 Journal metrics at Scopus Article at Scopus

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Mucin utilization by gut microbiota : recent advances on characterization of key enzymesRaba, Grete; Luis, Ana S.Essays in Biochemistry2023 / p. 345–353 : ill https://doi.org/10.1042/EBC20220121 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Seotud publikatsioonid 1

Co-metabolism of mucins and dietary fibres by gut microbiota = Mutsiinide ja kiudainete kometabolism soolestiku mikrobioota poolt

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NMR assignment of methyl groups in immobilized proteins using multiple-bond 13C homonuclear transfers, proton detection, and very fast MASPaluch, Piotr; Augusyniak, Rafal; Org, Mai-Liis; Vanatalu, Kalju; Kaldma, Ats; Samoson, Ago; Stanek, JanFrontiers in Molecular Biosciences2022 / Art. 828785 https://doi.org/10.3389/fmolb.2022.828785 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Non-invasive assessment of skin surface proteins of psoriasis vulgaris patients in response to biological therapyOrro, Kadri; Salk, Kristiina; Merkulova, Anna; Abram, Kristi; Karelson, Maire; Traks, Tanel; Neuman, Toomas; Spee, Pieter; Kingo, KülliInternational Journal of Molecular Sciences2023 / art. 16248 https://doi.org/10.3390/ijms242216248 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Non-toxic and ultra-small biosilver nanoclusters trigger apoptotic cell death in fluconazole-resistant Candida albicans via Ras signalingPrakteeksha; Singh, Braj R.; Gupta, Vijai Kumar; Deeba, Farah; Gathergood, NicholasBiomolecules2019 / art. 47, 23 p. : ill https://doi.org/10.3390/biom9020047 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Nucleolar enrichment of brain proteins with critical roles in human neurodevelopmentSlomnicki, Lukasz P.; Malinowska, Agata; Sepp, Mari; Timmusk, TõnisMolecular & cellular proteomics2016 / p. 2055-2075 https://doi.org/10.1074/mcp.M115.051920 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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P75 neurotrophin receptor signaling activates sterol regulatory element-binding protein-2 in hepatocyte cells via p38 mitogen-activated protein kinase and caspase-3Pham, Dan Duc; Do, Hai Thi; Bruelle, Céline; Kukkonen, Jyrki P.; Eriksson, Ove; Mogollón, Isabel; Korhonen, Laura T.; Arumäe, Urmas; Lindholm, DanJournal of Biological Chemistry2016 / p. 10747 - 10758 https://doi.org/10.1074/jbc.M116.722272 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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PCSK9 deficiency alters brain lipid composition without affecting brain development and functionPärn, Angela; Olsen, Ditte; Tuvikene, Jürgen; Kaas, Mathias; Borisova, Ekaterina; Bilgin, Mesut; Elhauge, Mie; Vilstrup, Joachim; Madsen, Peder; Ambrozkiewicz, Mateusz C.; Goz, Roman U.; Timmusk, Tõnis; Tarabykin, Victor; Gustafsen, Camilla; Glerup, SimonFrontiers in molecular neuroscience2023 / art. 1084633 https://doi.org/10.3389/fnmol.2022.1084633 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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A PDZ-like domain mediates the dimerization of 11R-lipoxygenaseEek, Priit; Põldemaa, Kaspar; Kasvandik, Sergo; Järving, Ivar; Samel, NigulasBiochimica et Biophysica Acta (BBA) - molecular and cell biology of lipids2017 / p. 1121-1128 : ill https://doi.org/10.1016/j.bbalip.2017.07.012 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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PGC-1α signaling increases GABA(A) receptor subunit α2 expression, GABAergic neurotransmission and anxiety-like behavior in miceVanaveski, Taavi; Molchanova, Svetlana; Pham, Dan Duc; Schäfer, Annika; Pajanoja, Ceren; Narvik, Jane; Srinivasan, Vignesh; Urb, Mari; Koivisto, Maria; Timmusk, TõnisFrontiers in Molecular Neuroscience2021 / art. 588230 https://doi.org/10.3389/fnmol.2021.588230 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Plankton biodiversity and species co-occurrence based on environmental DNA - a multiple marker studySildever, Sirje; Laas, Peeter; Kolesova, Natalja; Lips, Inga; Lips, Urmas; Nagai, SatoshiMetabarcoding and metagenomics2021 / p. 175-197 : ill https://doi.org/10.3897/mbmg.5.72371 Journal metrics at Scopus Article at Scopus

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Protein NMR spectroscopy at 150 kHz magic-angle spinning continues to improve resolution and mass sensitivitySchledorn, Maarten; Malär, Alexander A.; Torosyan, Anahit; Oss, Andres; Org, Mai-Liis; Samoson, AgoChembiochem : a European journal of chemical biology2020 / p. 2540-2548 https://doi.org/10.1002/cbic.202000341 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at Scopus

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Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic referencesPool, Allan-Hermann; Poldsam, Helen; Chen, Sisi; Thomson, Matt; Oka, YukiNature Methods2023 / p. 1506 - 1515 https://doi.org/10.1038/s41592-023-02003-w Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Restricted ADP movement in cardiomyocytes : cytosolic diffusion obstacles are complemented with a small number of open mitochondrial voltage-dependent anion channelsSimson, Päivo; Jepihhina, Natalja; Laasmaa, Martin; Peterson, Pearu; Birkedal Nielsen, Rikke; Vendelin, MarkoJournal of molecular and cellular cardiology2016 / p. 197-203 : ill https://doi.org/10.1016/j.yjmcc.2016.04.012 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Revealing calcium fluxes by analyzing inhibition dynamics in action potential clampLaasmaa, Martin; Birkedal Nielsen, Rikke; Vendelin, MarkoJournal of molecular and cellular cardiology2016 / p. 93-108 : ill https://doi.org/10.1016/j.yjmcc.2016.08.015 Journal metrics at Scopus Article at Scopus Article at WOS

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Revisiting the expression of BDNF and its receptors in mammalian developmentEsvald, Eli-Eelika; Tuvikene, Jürgen; Kiir, Carl Sander; Avarlaid, Annela; Tamberg, Laura; Sirp, Alex; Shubina, Anastassia; Cabrera-Cabrera, Florencia; Pihlak, Arno; Koppel, Indrek; Palm, Kaia; Timmusk, TõnisFrontiers in Molecular Neuroscience2023 / art. 1182499 https://doi.org/10.3389/fnmol.2023.1182499 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Safeguarding female reproductive health against endocrine disrupting chemicals-The FREIA projectDuursen, Majorie B.M. van; Boberg, Julie; Christiansen, Sofie; Jääger, Kersti; Salumets, Andres; Velthut-Meikas, AgneInternational journal of molecular sciences2020 / art. 3215 https://doi.org/10.3390/ijms21093215 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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SciPy 1.0 : fundamental algorithms for scientific computing in PythonVirtanen, Pauli; Gommers, Ralf; Oliphant, Travis E.; Haberland, Matt; Reddy, Tyler; Cournapeau, David; Burovski, Evgeni; Peterson, PearuNature methods2020 / p. 261-272 https://doi.org/10.1038/s41592-019-0686-2 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Seotud publikatsioonid 1

Author Correction: SciPy 1.0 : fundamental algorithms for scientific computing in Python (Nature Methods, (2020), 17, 3, (261-272), 10.1038/s41592-019-0686-2)

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Secretome profiling reveals virulence-associated proteins of Fusarium proliferatum during interaction with banana fruitLi, Taotao; Wu, Yu; Wang, Yong; Gao, Haiyan; Gupta, Vijai Kumar; Duan, Xuewu; Qu, Hongxia; Jiang, YuemingBiomolecules2019 / Art. nr. 246 https://doi.org/10.3390/biom9060246 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Serum levels and removal by haemodialysis and haemodiafiltration of tryptophan-derived uremic toxins in ESKD patientsPaats, Joosep; Adoberg, Annika; Arund, Jürgen; Fridolin, Ivo; Leis, Liisi; Luman, Merike; Pilt, Kristjan; Uhlin, Nils Fredrik ArneInternational journal of molecular sciences2020 / art. 1522, 19 p. : ill https://doi.org/10.3390/ijms21041522 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Spermatozoa induce transcriptomic alterations in bovine oviductal epithelial cells prior to initial contactReshi, Qurat Ul Ain; Viil, Janeli; Ord, James; Lättekivi, Freddy; Godakumara, Kasun; Hasan, Mohammed Mehedi; Nõmm, Monika; Jääger, Kersti; Velthut-Meikas, Agne; Jaakma, Ülle; Salumets, Andres; Fazeli, AlirezaJournal of cell communication and signaling2020 / p. 439–451 https://doi.org/10.1007/s12079-020-00575-2 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Structure of a bacterial ice binding protein with two faces of interaction with iceMangiagalli, Marco; Sarusi, Guy; Kaleda, Aleksei; Bar Dolev, MayaThe FEBS journal2018 / p. 1653-1666 : ill https://doi.org/10.1111/febs.14434 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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TAC-seq : targeted DNA and RNA sequencing for precise biomarker molecule countingTeder, Hindrek; Koel, Mariann; Paluoja, Priit; Velthut-Meikas, Agnenpj genomic medicine2018 / art. 34, 8 p. : ill https://doi.org/10.1038/s41525-018-0072-5 Journal metrics at Scopus Article at Scopus Journal metrics at WOS Article at WOS

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Biokeemia, geneetika ja molekulaarbioloogia. Molekulaarbioloogia (category)

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TTÜ department 1